Gene Pcal_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0924 
Symbol 
ID4909376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp877722 
End bp878375 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content59% 
IMG OID640124672 
ProductMn2+-dependent serine/threonine protein kinase 
Protein accessionYP_001055815 
Protein GI126459537 
COG category[T] Signal transduction mechanisms 
COG ID[COG3642] Mn2+-dependent serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGGCT CGCTGTTGGC CAAGGGGGCA GAGGCAGAGC TGTACCTAGT GGAGTGGTTC 
GGCCTAAGGG CCGTCTTAAA GTGGCGTAAG CCAAAGGCCT ATAGACACCC CGCCCTCGAC 
TACCAAATAA GGCGCAGGCG CACGATAAAC GAGGTGCGCA ACATGTACAT AGCCCACTCG 
CTAGGCGTAA AAGTGCCGGC AGTCTACTTC TTCGACCCCG AGAAGGCGGC AATCGTGATG 
GAGTACGTGG AGGGCGCCAA CTTGAGAGAC CTCTTGGCAC AAGGCGCCTA CGACCTCTTA 
AGAGACGTGG GGAGGCTAGT CGGCGTAATG CACAAGGCCG GCTTAATCCA CGGCGACCTG 
GCGCCGACGA ATATAATACG CGCGGGGGAC AGCCTCTACT TCATAGACTT CGGCCTAGGC 
GAAGTGAGGA AGGGCTGGTC CAAGCGCACC GCCGTGTTCA TGGCAAGAGA CATCAACGTC 
TTGTTTAGAA CGCTGGACCT CTACGGCGAC AGAGCCGAGG AAATGAAGCG CCTCTTCTGG 
GATGGCTACG GAGAGGAGAT GGGGGAAAGG GCGGCCGCGG TAGAGCGGGA GTTGACAAAG 
ATACGCGCCG CCGGACGCTA CGCAGAGCGT GTCAGCAGTT CCTCGCGGCG ATAA
 
Protein sequence
MEGSLLAKGA EAELYLVEWF GLRAVLKWRK PKAYRHPALD YQIRRRRTIN EVRNMYIAHS 
LGVKVPAVYF FDPEKAAIVM EYVEGANLRD LLAQGAYDLL RDVGRLVGVM HKAGLIHGDL 
APTNIIRAGD SLYFIDFGLG EVRKGWSKRT AVFMARDINV LFRTLDLYGD RAEEMKRLFW 
DGYGEEMGER AAAVERELTK IRAAGRYAER VSSSSRR