| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0870 |
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| Symbol | |
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| ID | 4908363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 828097 |
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| End bp | 829683 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124619 |
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| Product | ABC transporter related |
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| Protein accession | YP_001055762 |
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| Protein GI | 126459484 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.865131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCT TCTTAAAACT ATTGAAATAT GACATAGAGT ATACGAAAAA ATACTGGAAA
TACTCTGTAC CTTTCTATAT CTCCTATCTG CTAGATGTGG CCGTATTCCT TCTTATGAAT
TACTTACTTA AACAGCTTGT AGATTCCGCG ATTTCTGGCG AGTTACATAA TGTAATATTC
TACACTGCTT TCTTTCTCCT ATCTGTCACA TCACGATTTG TACTAGTCTT CCTCGGCGAC
TACATCTCCG ACCTGTATAA GAAGGCAGTG GAGCTTGACT TGGCCCTCCG CATTGTTGAA
AGGAGGGTTG AGGGGCCTTC GCATCCGCCT GGTGAGGTCT TGTCTCGCGT TACCGCTGAC
TTGGAGAACG CGGTTTACGC CATTGCGACG CCGCTTTGGC TCTTCTTCGT TGTCGGGGAT
GTGGCCGCGG TTGCCCTCTT CGCCTACTGG CTTCAGCCCC TCTCCCTTCC CCTTATACTC
CCCTTCGCCG CGCTCTACGC CGTTTTGATG AAGAGGGTGG GGCCGCGCCT ATTGGACGCT
AGGTCTAGGG AGAGAGAGGC CTACGGCGGC TGGTTCAAAA GGCTGAAAGA GGCTGTGGAG
GGGGCACACA GCCTACACAG GCTGGGGCTG AGGAGAGCGC CCAAGCTGTT GACAGACGCC
ACAGCCACAT ACTTCGCCAA GTTCAAAAAG TTCACGCTGT ACAGCCGTAG TATTGACTAC
CTGCTTCAAG CCCCGGCACA AGTAGGGCCC AACTTCGTCT TTGCAGTAGC GCTACTTTTG
GCTCTGCAAG GGCAGGGCAC TGTGGGAGAC GCAGTGGCGC TGAGAAACTC CCTCAACGGA
CTTTTCCTCC CCATCGGCCA CCTCATGTCC ACGGTGGGCT CTTTTTACGT TATGGCCTCG
TCGTTTTTGC GTGTTGAGCC TCTTCTGCGC TCTGCACAAC CCCGCGTTGT GAGGGGGGCC
GTGGCGTATC TAAGGGACGC GGTCTTTTCT TACGACAACG GCGTAGTTGT GGAGGTGGTG
GGTGAGGTGG CTGTTGAGGA GGGTGACTTT GTGTGGGTTA GGGGGCCTTC TGGGGCTGGG
AAGTCCACCT TGGCTAAGGC GCTGTGTGGC CTTGTGGAGC CCGCCGGCGG CGTTGCGGTG
GCGGCTGTGG ACTGCGTCTA CGTGGGCAAC GACGACTACC TCTTCGACGC CACTGTGTAC
GAAAACATCG ACCTTTGGGA GGGGAGGCCT AGGGGGGATG TGGAGTGGGC CGCCGCGGCG
GCGGGGGTGG ACTTCCCCTT GGACAAGAGG TGTGGGGAGG GGGGTAGGGA GCTCTCCGAG
GGGCAGAGGC AGAGGGTCCT CATCGCCAGG GCTCTGCTGA GGAGGCCTAG GCTCCTCGTC
CTCGACGAGG CCACCTCCGG CCTAGACAAA GAGCTGGAAA CCAAAGTGCT ACAGGCAGTG
CGGCAGGCCG CAAAGGCAGT GGTAGTAGTG TCGCATAGAG ACAGCCCAGC ACAGTACAGC
AACAAAATAG TAGAAGTAAG AGAAGGAAGG GCGTACATGG TAACAGTCAA TAAAGGCGTT
GGCGGGGATA GTTCTGCGCA AAGGTGA
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| Protein sequence | MSLFLKLLKY DIEYTKKYWK YSVPFYISYL LDVAVFLLMN YLLKQLVDSA ISGELHNVIF
YTAFFLLSVT SRFVLVFLGD YISDLYKKAV ELDLALRIVE RRVEGPSHPP GEVLSRVTAD
LENAVYAIAT PLWLFFVVGD VAAVALFAYW LQPLSLPLIL PFAALYAVLM KRVGPRLLDA
RSREREAYGG WFKRLKEAVE GAHSLHRLGL RRAPKLLTDA TATYFAKFKK FTLYSRSIDY
LLQAPAQVGP NFVFAVALLL ALQGQGTVGD AVALRNSLNG LFLPIGHLMS TVGSFYVMAS
SFLRVEPLLR SAQPRVVRGA VAYLRDAVFS YDNGVVVEVV GEVAVEEGDF VWVRGPSGAG
KSTLAKALCG LVEPAGGVAV AAVDCVYVGN DDYLFDATVY ENIDLWEGRP RGDVEWAAAA
AGVDFPLDKR CGEGGRELSE GQRQRVLIAR ALLRRPRLLV LDEATSGLDK ELETKVLQAV
RQAAKAVVVV SHRDSPAQYS NKIVEVREGR AYMVTVNKGV GGDSSAQR
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