Gene Pcal_0850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0850 
Symbol 
ID4908702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp812211 
End bp812696 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content46% 
IMG OID640124599 
Producthypothetical protein 
Protein accessionYP_001055742 
Protein GI126459464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.692969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG TAAGCGAGTT AGTCAAAGAG TTGAGGTCTA GGTGGATTGC CACTGAGAGA 
GTTGTAGCCA CGGCGGCGGG GAAGTCTAAG CCTGTTCTCC CAGACGAGGT AGTGCTACAA
CATTTAAAGG CAGCCGCCGA GTTTCTTGTA AGATCTGGCA CATTAGACGT CGTAGTTGAA
CTCTTGGCGA CGCTTGCAAT GTTACAAGAC GTTGTAACAG ATAGAATGGT GGACGAGTGG
GCAAGAAACC TAAGGAAAGT AGGCCTCCTA GCCGACAGTC TTACAAGGAC GTCGCTTCTA
GAGGTGTTGT CTAATGCGCT ACTAGACGTA GAGTTAGAAA GAGCAATTCT AGAAGTAAAA
GACGGAAAAA AGATCTCGCT TATCACGCTA ATTTCTCTGT TTAACGACCA AGAAGTACGC
CAAGGTCTCT ATATCGTACT CAAGCTTCTA AAAGCGTTGG GAAAAGCAAC TAAGACGCTT
GAGTAA
 
Protein sequence
MSEVSELVKE LRSRWIATER VVATAAGKSK PVLPDEVVLQ HLKAAAEFLV RSGTLDVVVE 
LLATLAMLQD VVTDRMVDEW ARNLRKVGLL ADSLTRTSLL EVLSNALLDV ELERAILEVK
DGKKISLITL ISLFNDQEVR QGLYIVLKLL KALGKATKTL E