| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0812 |
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| Symbol | |
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| ID | 4909612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 776105 |
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| End bp | 776941 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640124561 |
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| Product | protein of unknown function DUF340, membrane |
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| Protein accession | YP_001055704 |
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| Protein GI | 126459426 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2431] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTGAGG TAGTGAAATA CGTAGCGCCA ATAGCGTTTG GGTATCTCAT CGGCGTTATA
ATTAAGAAGA GGCCTCCTCA ACTCCTCTTC ACAGTCGTTG TAGTGGCTTT GGTGTTTTTC
GTTTCTGCAA ATGCGGCGGG CGTTGTCTTG GGAAATCTCG CCACGTTCCT CGTCGTGTCC
CTCCTCTACG CCCTGGCCCT TGTGGTAGTC ACCGCAGTCT TGGGCTCGCT TGTGGATAGA
GGCAGCGCCG GGGGCTCAGT GGGGCGACCC TCTATCTCCA TCTACGTGGC CACGTCGCTC
GTGGCAGGGC TAGTTGTCGG CGGCTTTTAC AAGGCCAACT ACGCCGCTTT GATAGACCCC
CTCCTGATCT TCCTCCTCCT CGTAGCTGGA ATTGACATGG CCGGGGTTGG GCTTAAGTGG
GAGAAGAGGG CCCTCCTGGC GCCCGCCGTG GCGCTGGCGG GGGCTGCGGC AGTGGCGCCT
CTCTTCACCC TCACGCTCGG CATTACACCA GCAGTGGCAT TTGGGCTAGG GTGGTACTCC
TTCACTGGCC CCTACTTGGC GAGTGCCGGA GATGAGGTCG GCGGGGCCTA CGGCCTCCTT
GTAAACTTCT TGAGGGAGCA ACTCACCTTC CTCCTGGGGC CCCTACTCGC CAGGAGGTTC
AGCCGGGTCG GCGTACTGGC AGCCGGCGGC GCAACTACCA TGGACAACAC GCTCCCCCTC
TACGTAGCCC TCTACGGCCC CTCCTTTTCT CTATACGCCT TCGCCAACGG CGTAGTCTTG
ACGTTCCTCG TGCCAGCGAT TGTCCCACTA GTCCACACCC TAGCCCTACA CCCCTAG
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| Protein sequence | MFEVVKYVAP IAFGYLIGVI IKKRPPQLLF TVVVVALVFF VSANAAGVVL GNLATFLVVS
LLYALALVVV TAVLGSLVDR GSAGGSVGRP SISIYVATSL VAGLVVGGFY KANYAALIDP
LLIFLLLVAG IDMAGVGLKW EKRALLAPAV ALAGAAAVAP LFTLTLGITP AVAFGLGWYS
FTGPYLASAG DEVGGAYGLL VNFLREQLTF LLGPLLARRF SRVGVLAAGG ATTMDNTLPL
YVALYGPSFS LYAFANGVVL TFLVPAIVPL VHTLALHP
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