Gene Pcal_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0793 
Symbol 
ID4909470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp759610 
End bp760440 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content57% 
IMG OID640124542 
ProductNAD synthetase 
Protein accessionYP_001055685 
Protein GI126459407 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTAAAA AGGTGTCTTG TTTTCTGTCT GTGGATCCTA AGTCTGTCGT CGACGCGGTG 
GACTACGACA AGGCGGCTTC AATAATTGTA GAGTTTATAG TGAGGCAGGT GGGTGAGGCA
GGTGCGCGGG GCGTAGTTGT GGGGCTTAGT GGTGGGATTG ACTCCACGGT GGCGGCGGCG
CTTGCGGTCA AGGCGCTTGG GAGTGAGAGA GTTCTGGGGT TGATAATGCC GTCGGTCTTT
ACGCCTGTGG AGGATGTGCG AGACGCTGAG GAGGTGGCGG AGAGGCTGGG GATTCGCATG
AGGAAGGTGG ACATTACGCC GATTGTGGAG AGCTTTAAGA GGTCTATACC GGACTACGTA
GAGGATAGGC TGGCGTCGGG GAACCTCCTC CCGAGGATTA GGATGACCAT ACTCTACTAC
TACGCCAATA GGGACAACTT GCTGGTGTTG GGGACTGGGG ATAGGAGCGA GCTTCTCTTG
GGGTATTTCA CCAAGTACGG GGACGGCGGC GTGGATCTGT TGCCCATCGG CGGCCTTTAC
AAGCTCCAGG TGAGAGAGAT GGCTAGGCGG CTGGGCTTTT CTAAAATAGC GGCTAAGCCC
AGTAGCCCCC GGCTCTGGCC TGGGCACATG GCCGAGGCGG AGCTCGGCGC TACCTACGAC
GTAATAGACC CCATACTTTT CGCCGTATTT GACATGGGGA AGCCCGTGGA TGAGGTGAAG
AGGGTGTACG GCCCAGTGGT TGACCTAGTG CTCCAGAGAG TGCAGCGGAA TAGGCACAAG
CTTAACCCGC CTCCCATCCC CGACCTAGCC CCCGCGAGGA GGAATGTTTA A
 
Protein sequence
MFKKVSCFLS VDPKSVVDAV DYDKAASIIV EFIVRQVGEA GARGVVVGLS GGIDSTVAAA 
LAVKALGSER VLGLIMPSVF TPVEDVRDAE EVAERLGIRM RKVDITPIVE SFKRSIPDYV
EDRLASGNLL PRIRMTILYY YANRDNLLVL GTGDRSELLL GYFTKYGDGG VDLLPIGGLY
KLQVREMARR LGFSKIAAKP SSPRLWPGHM AEAELGATYD VIDPILFAVF DMGKPVDEVK
RVYGPVVDLV LQRVQRNRHK LNPPPIPDLA PARRNV