Gene Pcal_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0781 
Symbol 
ID4910256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp749091 
End bp750275 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content60% 
IMG OID640124530 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001055673 
Protein GI126459395 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATAG TTATTGCGGG CTTCGTTAGG ACGCCCATTG GAAAGTTTGG AGGCGCCCTC 
AAGGACGTGA AGACTCCCCA CCTAGCCGCC TTTGTCATAA AGAAGTTGCT GGAAAGGACG
GGGCTCTCGG GAAAGGAGGT GGACGAAGTG GTGTTTGGCT CCACCCTCCA GGGGGGCATG
GGTCAAAACT TGGCGAGGTA CGCCGCTCTG TTGGCTGGCC TGCCGGTGGA GGTGAGCGCA
TATACGGTGA ACAGGGTCTG TTCTTCGGGG ATGCAGGCCA TTATAGAGGC ATATAGGGAA
ATCGCGGTGG GGGACGCCTC GGTCGTAATC GCGGGCGGCG CCGAGTCTAT GTCTACGCCG
CCTATATGTC TTCCAGACGA CGCCCGGTGG GGGCTGAGGC ACTTCATCGG GCGGCGGGCC
GAGCTCAGAG ACTTGATGGT ATACGACGGT CTGACGGACC CCTCCAACGG GCTCCTCATG
GGCGAGGAGG CCGAGCTAGT GGCTAGGGAG CACAAAATTA CGCGGGAGGA GTTGGACTGG
GTGGCTTATG AGAGCCACAT GAGGGCGTGG CGGGCTACTG AGAACAGGTG GTTTGAAGAA
ATGGAGCCCA TAGACGGCGA GTTAGGCGGA GTGCGCGTCA AGTTAGACAG AGACGAGGGC
ATTAGGCCGG ACACCACGCT TGAAAAATTG GCCAAGCTTA AGCCCGCCTT TAGGCCCGAC
GGCGTGTTGA CCGCGGGGAA CTCCAGCCAG CTGTCCGACG GAGCGGCCGC CCTCCTGCTC
ACCACTGAGG AGAAGGCAAA GGAGCTCAGC CTCAGGCCAG TGGCGCGCAT CCTTGGCTAC
AGCTGGCACA TGGTGGAACC CTGGCGATTC GTCGAGGCCC CCCTCTACGC TGTTCAAAAA
CTGTTGAAGA AGCTGGGCAT GGGAATTAAC GACTTTGACT ACTTTGAAAA CAACGAGGCC
TTCGCCGTGA ACAACGTGCT ATTCCACAGA TTCCTCGATG TGCCTTACGA CAAGCTGAAC
GTCTTCGGCG GCGCCATTGC CCTCGGCCAC CCGCTCGGCG CCTCGGGGGC AAGGATTGTC
ACCACGCTCA TATCGGTGCT TAGGCGCATG GGCGGGAGGA GAGGCATCGC CGCGCTCTGC
CACGGCACAG GTGGAGGAAC GGCCCTGGCC ATTGAGCTTG TCTAA
 
Protein sequence
MGIVIAGFVR TPIGKFGGAL KDVKTPHLAA FVIKKLLERT GLSGKEVDEV VFGSTLQGGM 
GQNLARYAAL LAGLPVEVSA YTVNRVCSSG MQAIIEAYRE IAVGDASVVI AGGAESMSTP
PICLPDDARW GLRHFIGRRA ELRDLMVYDG LTDPSNGLLM GEEAELVARE HKITREELDW
VAYESHMRAW RATENRWFEE MEPIDGELGG VRVKLDRDEG IRPDTTLEKL AKLKPAFRPD
GVLTAGNSSQ LSDGAAALLL TTEEKAKELS LRPVARILGY SWHMVEPWRF VEAPLYAVQK
LLKKLGMGIN DFDYFENNEA FAVNNVLFHR FLDVPYDKLN VFGGAIALGH PLGASGARIV
TTLISVLRRM GGRRGIAALC HGTGGGTALA IELV