| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0737 |
|---|
| Symbol | |
|---|
| ID | 4908697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 695930 |
|---|
| End bp | 696646 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640124486 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001055629 |
|---|
| Protein GI | 126459351 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1427] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000000184342 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGTAG TAAGGCTGAA ATACGCCCAC AACGACCCCC TCTTCCACCG CGCCAGAGTA
GCCGCCATAC CCGCCTCAAA CCTCGCCTCA GCCCAGCTAC TCCTAACAGG CGAGGCCTGC
TGCGGCTTTG TCCCAGTCAC CCTAGCCGCC AGGCACGGAC TCCCAGTGGT GCCAAGGCTG
GCGGTGTACA GCGACGGGCC CGTGATATCC TCCCGCCTCT TCAAAGGCGG CGGCGCGGGA
TACGCCGCAG TGGAAGACAC CACGGTAAGC GCCCTCGCAC TGAAGGCCGC CATGGGGATA
GAGCTACAGC GGGTGGCCAC CCTAGACGGC GCCTTCGCCA AATACGCAGG CGTGCTAGTA
ATAGGCGACG ACGCGTTGCG CCTAGTAGAC GCGGGGCGCC CACACATAGC CGACGTGGGA
GAGGCCTGGC GGGAGAAATT CGGAACCCCC CTCGTCTACG CCGTATTCGC CGCCTCCCCC
AAGGCAGACA GACAAGAGGT GTTCCGCGCA GTCGAAGAGC TGGAAAACTC CCTAGCCCAC
TTCTACGAAA ACCCCACGCC CCTCGTGGAA CAGGCGGCCA AGCGCCTCGG CATCTCCACA
CAACTAGCCG AGCGGTACTT CGCCACGGGC GTCAAATACC ACGTAACCCC CCGCGTGGTG
CAAGCCCTCC AAAAACAGGC AGAGATAATG GGCCTAGGAG AGCTCAACCT ACTCTAG
|
|---|
| Protein sequence | MKVVRLKYAH NDPLFHRARV AAIPASNLAS AQLLLTGEAC CGFVPVTLAA RHGLPVVPRL
AVYSDGPVIS SRLFKGGGAG YAAVEDTTVS ALALKAAMGI ELQRVATLDG AFAKYAGVLV
IGDDALRLVD AGRPHIADVG EAWREKFGTP LVYAVFAASP KADRQEVFRA VEELENSLAH
FYENPTPLVE QAAKRLGIST QLAERYFATG VKYHVTPRVV QALQKQAEIM GLGELNLL
|
|---|
| |