| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0730 |
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| Symbol | |
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| ID | 4908564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 691614 |
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| End bp | 692636 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124479 |
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| Product | cytochrome c-type biogenesis protein (CcdA) |
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| Protein accession | YP_001055622 |
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| Protein GI | 126459344 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000473312 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCGTG TACTCTTAGC AGTCCTAACC CTAGCCCTGC TCCTTACAGC GGGCAACATA
ACTGTGATAT ACTTTTGGCA ACCCAACTGC CCAGGCTGTA AATACATGGA AGAAGTCACA
TTCAAAGATG CACAAGTCCA AGCCTTCTTA GCCGCTGTCC GTTTCGAAAA GCGGGACGCC
AGAGAGGTGC AGTACGTGGA GGCATATGCT CAGAGGGCGT TAGTAGTCGA GGGCGCGTCC
TTGACCTTTC TCAACGGTTC TTTAACCACT TCGGGAGCCA CCAAGATACG CGTAGTAGAG
GTAGACGGCC GCGGCCGTTT CCCCATCTTG GCAACCCCCA CGGTGGTTGT GCTAGAGGCA
GATGCCGGCG AGGTATACCT CAGAGGATAT CTGCTAGGCG CCCTGCCCCC CGAGCAGTTT
CTCTCATTTA TAAAGAACGC CACTAGCCCA ACTCCTCTAC AGCCGGCTGC CAGCTCGCCA
GCCACGGCGT TGGCGATTGC GGCGGCGCTA GGCGCGGCGT CAGCCGCCTC GCCATGTGTG
ATAGTCCCCC TGGCCTTGGC ATCTACCAGG AGGAGGCTCT ACGTCTACTT CCTAGGAGCG
GCTACAGGCT ACGCCGCGTG GGCCGCAGCT CTGGCGCTAT TGGGGGCGCC ACTTGTCTTA
GACAAGTACA CAGCCGCGGC CTTAATCGCC CTCTTCGGCG CCGCGTATTT GCTGGGCCCG
CGGGCGCCTC TCTGGAGGGT GCAGACTCTA TTTCACAAGC TGTCCAAGGG CTCAGACTTT
CTAGCAGGGG CATTTTCGCC GTTTCTGTCT CTGCCTTGCC TCCTCCCCTT CCTAGGGATT
GCCGGAACTC TGGCACTGGC GCTCCTAGCC ACGCCTTTAG AGAGATTTCT CGCAATGTTC
CTCTTCGGCG TATTCCACGT GGCCGCGGTC TCGGCGGCTG GCGCAGCTGT GCAGAAGACC
AGGCTTAGGA GATATGTAAC TCTGCTTTTG CTAATAGGCG CATTTCTATA CCTACTTCTC
TAA
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| Protein sequence | MARVLLAVLT LALLLTAGNI TVIYFWQPNC PGCKYMEEVT FKDAQVQAFL AAVRFEKRDA
REVQYVEAYA QRALVVEGAS LTFLNGSLTT SGATKIRVVE VDGRGRFPIL ATPTVVVLEA
DAGEVYLRGY LLGALPPEQF LSFIKNATSP TPLQPAASSP ATALAIAAAL GAASAASPCV
IVPLALASTR RRLYVYFLGA ATGYAAWAAA LALLGAPLVL DKYTAAALIA LFGAAYLLGP
RAPLWRVQTL FHKLSKGSDF LAGAFSPFLS LPCLLPFLGI AGTLALALLA TPLERFLAMF
LFGVFHVAAV SAAGAAVQKT RLRRYVTLLL LIGAFLYLLL
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