Gene Pcal_0689 details

Gene Information

• Locus tag: Pcal_0689
• ID: 4909486
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 649665
• End bp: 650189
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640124438
• Product: hypothetical protein
• Protein accession: YP_001055581
• Protein GI: 126459303

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.00351729
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGACGGCTG TGCTACTCGC CGTAGTGCTG GCGGCGCTGT TGGCGGTTCT CCACTTTGTG 
TGGCCATTCT TGGCGAAGAG GGGCGGGGCC TACAGCACTT CCAGCGTTGC GGCGGCTCGG 
TGGGCGTTTC AAGTGGTGGG GGTGAGGGGG AAGAGGGTTG TGGACTTGGG TTGCGGCTAT 
GGCCGAGTGC TGGCGTTGGC TAAGTCCATG GGCGCCGCCT CGGTGGCGGG GGTGGAGATT 
GACCCAATCC GCTGGCTAAT CTGCACGGCG AGGTGTCGGT GTAGGGTGGC TCTGGGGGAC 
ATGTTTAAAT TCGACGTGTC AAACGCCGAC GTCGTCTACA TATTCCAGTG GCCCTCTGTC 
AACGCCAGGC TCGCCGAGAA GCTAAGGAGG GAGCTGAGAC CAGGCGCCTA CGTGGTGTCG 
TACATGTGGG AGGTGCCCGG CCTAGCCTTG GTCGCCCACA ACCCCGCCCT GCGCGTGTAC 
ATCTACAAGC GCCCTGAAGA GCCTAGACAA GAGCTCTCTC ACTGA 

 

Protein sequence

MTAVLLAVVL AALLAVLHFV WPFLAKRGGA YSTSSVAAAR WAFQVVGVRG KRVVDLGCGY 
GRVLALAKSM GAASVAGVEI DPIRWLICTA RCRCRVALGD MFKFDVSNAD VVYIFQWPSV 
NARLAEKLRR ELRPGAYVVS YMWEVPGLAL VAHNPALRVY IYKRPEEPRQ ELSH