Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0638 |
Symbol | |
ID | 4908230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 599503 |
End bp | 601281 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640124386 |
Product | translation initiation factor IF-2 |
Protein accession | YP_001055530 |
Protein GI | 126459252 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00491] translation initiation factor aIF-2/yIF-2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACAGA AGATTAGGTC GCCTTTCGTG GTTGTGATGG GGCACGTGGA TGTGGGGAAG ACCCTCTTGT TGGACAAGAT TAGGGGCACC TCTGTGGCGT ATAGGGAGCC GGGCATGATC ACGCAACATA TTGGCATGAG CCTTGTCCCG TGGCCGGCTG TGGAGAAGTT CGCGGGCCCC CTCGTGGATA GGCTGAAGCT GAGGGGGAGG ATCTGGATAC CCGGCTTCCT CTTCATTGAC ACGCCGGGCC ACGCCGCCTT TTCGAACTTG CGCAAGAGGG GCGGGTCAGT GGCCGACTTG GCCATACTTG TGGTAGACAT TACGTCGGGT TTGGAGGACC AGGGTGTGGA GTCGCTTAAG CTTATCCAGA GCAGGGGGGT CCCCTTCGTA ATTGCTGCAA ATAAGCTGGA CCGGATCTAT GGCTGGAAGT CTGTGGAAAA CCGCCCGTTT CTCTTCGCGG TTGAGGAGCA GGAGTGGCAC GCGGTGGCTA CGCTGGAGGA GCAGATAGGC AAGTTGATAA CGCAACTCGC AAACCTCGGC ATAGACGCCG ACCGGTATGA CAGAGTGAGA GACTTCTCGA AGCAGGTGCC GATTGTCCCC ACGAGCGCGG TCACCGGCGA GGGGGTGGCC GACCTGCTCC TGGTGCTTGC TGGGGTTAGC CAGCGGTTTA TACCGCGGGA GAAGCTCCAA GTCAGAGACG GCCCCGCGCG CGGCGTCGTG ATGGAGGTGA AGGAGGAGAG GGGCCTCGGG GTCGTGGCCG ACGTCATTTT GTACGACGGC AAGCTGAGGA AGGGCGACGT GATAGTCACG GCGGGGCTAG ACGGGTCTCG GCAGGCCAAG GTGAGGATGC TCATAATGCC GAAGTCGCTG GAGGAGATGC GGGACCCCGA GGACAAGTTC ATGGCTGTGC AAGAGGTGGA GGCGGCGGCG GGCGTGAGGG TAGTGGCGGA GGGGCTTGAG GGCGTGGTGG CGGGCGCCCC GCTTCTAGCC GTGTGGGACC CAAAGGACCT CCCCGAGGCG CTTAAGAGCG TGGGGGAGGA GATAGCGGAG ATCAAAATAG AGTCGGACAA GGAGGGCGTA ATCGTTAGAG CAGACACCTT CGGCACTCTG GAGAGCATAA TACTCTTCTT AAGACAGCAG GGAGTCCCCG TCAGAAAGGC GGACGTGGGG CCGCCTACGC ACAAGGACGT GGTGGAGGCG GTGCTGAGCA GGAGGAAGAA CCCCGCCTAC GGAGCAATCC TGGCCTTCAA CGTGAAAGTG CCCCCGGAGG TGGAGACCGA GGCCCAGTCC TCTGGAGTGA AGATAATACG CGGGGAAATC CTCTACCGCA TATTCGACGA GTACGTCAAG TGGTCTACCG AGGTGAAGAC GAAGACCGTT GAGCAAGTGC TCTCCCAGCT CACCCGCCCC GCGAAAATCC AAATACTCCC CGGCTACGTG TTTAGGAGGA GCGACCCGGC CATAGTGGGC GTGAAAGTGT TGGCCGGAAC GCTCAAGCCC GGCGTCACCT TGGCCAAAGA CGGCAGAGAA GTGGGCAAGG TAATGCAGAT ACAGCGCCAG GGCAAACCCG TCGCAGAGGC TGTGGCAGGC GACGAGGTGG CCATATCTAT ACAGGGAGAC GTCATAGTGG GCCGTCAGAT AAAGGAGGGA GACGTGCTCT ACGTCTATAT CCCAGACGAG CAGGCCAGAC AGTGGCTATT CCGCTACAAG CAGTACCTCA GAAAAGACGA GGTAGAGGCC TTAGAGGAGT ACCTGAAGAC AAGAAAGAAG TCAGCATAA
|
Protein sequence | MQQKIRSPFV VVMGHVDVGK TLLLDKIRGT SVAYREPGMI TQHIGMSLVP WPAVEKFAGP LVDRLKLRGR IWIPGFLFID TPGHAAFSNL RKRGGSVADL AILVVDITSG LEDQGVESLK LIQSRGVPFV IAANKLDRIY GWKSVENRPF LFAVEEQEWH AVATLEEQIG KLITQLANLG IDADRYDRVR DFSKQVPIVP TSAVTGEGVA DLLLVLAGVS QRFIPREKLQ VRDGPARGVV MEVKEERGLG VVADVILYDG KLRKGDVIVT AGLDGSRQAK VRMLIMPKSL EEMRDPEDKF MAVQEVEAAA GVRVVAEGLE GVVAGAPLLA VWDPKDLPEA LKSVGEEIAE IKIESDKEGV IVRADTFGTL ESIILFLRQQ GVPVRKADVG PPTHKDVVEA VLSRRKNPAY GAILAFNVKV PPEVETEAQS SGVKIIRGEI LYRIFDEYVK WSTEVKTKTV EQVLSQLTRP AKIQILPGYV FRRSDPAIVG VKVLAGTLKP GVTLAKDGRE VGKVMQIQRQ GKPVAEAVAG DEVAISIQGD VIVGRQIKEG DVLYVYIPDE QARQWLFRYK QYLRKDEVEA LEEYLKTRKK SA
|
| |