| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0599 |
|---|
| Symbol | |
|---|
| ID | 4908719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 561180 |
|---|
| End bp | 561539 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640124347 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001055492 |
|---|
| Protein GI | 126459214 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1645] Uncharacterized Zn-finger containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAAGG AGAGAGATGT GGTGAAGAGA ATCGCCCAGC TAGTTAGGGC AGGCGCCACT
CTTACCTCGT ATACATGTCC AGTTTGTGGC ACAGTTTTAG TAAAACTGAA GACCGGAGAG
CTATATTGCG CAAACTGCGA ACGCACGGTG GTGTTAGTAA AAAGCGACGA GGAGGCTCAG
CAAGCGGTTG AAGTGGTGCA ACTACGTGAA GTTAGGAGAA TCGTGTTTGA CAAAATTCTG
CAACTAGGCC GCGAGTTGGA GAAGCTAAGC GCATCGGAGA TGGTGGACCA CCTAAGGTCT
ATGTCTATTC TTCTCGACAT TTACGAAAAG TTGTCTAAGA TACAGTCCTC CAAGGTTTAG
|
|---|
| Protein sequence | MEKERDVVKR IAQLVRAGAT LTSYTCPVCG TVLVKLKTGE LYCANCERTV VLVKSDEEAQ
QAVEVVQLRE VRRIVFDKIL QLGRELEKLS ASEMVDHLRS MSILLDIYEK LSKIQSSKV
|
|---|
| |