| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0596 |
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| Symbol | |
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| ID | 4908906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 559027 |
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| End bp | 559773 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640124344 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001055489 |
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| Protein GI | 126459211 |
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| COG category | [K] Transcription |
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| COG ID | [COG1395] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGTTGC TAGAGGCTAC GTTAAATATT GTGAAAGCCC GTGGAGAGCC GCTATTCCTA
GACGTATCTA GGCCATATGC TTATACTTTG GTCGCCGAAA TAAACCGGGA GAGGATGCTA
ATAAGAATTG CGCAAAATGC GGAAGACGTC TCAGGGAGTT CTATAAAAGA CCTCAAACTT
CTCTCCTCTT ACACCAATGT CACAAGTCTA TGTATTACGT CAACTGTAAG GGGGGAGGTT
CTGAGGCGCG GCGTAGTATA CACAAGAGAT AACATAACAT TTATCTCACT ATCAACATTC
ACAGACCTTG TAGACGGCAA GCCACCGATA TTTAGGCTCA ACCACGGGTC TATAACTGCG
GCAGTGGACG GAAAGAAGTT GCGCCAAAGA CGTGAAGAGG CGGGCATAAG CCTTGGCGCA
CTTGCCAAAG AACTTGGCGT ATCTAGAGAG ACCGTATATA GGTACGAAAG AGAGGAAATA
GAGGCCCCCG CTAAAATAGC GCAGAAGTTG ATTGACATGT TTGGGGAAGA CGTGATAAAG
AAGATAAGTA TTGATAAAGT GCATGTGAGC GCTGAGGAGC TTGCGAGCAG AAGCTTGGGC
AAAGACACGT ACAAACTCGT GGACTCGCAC CCAGATGCGC TTAGGGTTCA AGACAGGGTC
CTCTTCATAT CGACTTCGGC AGATAAATTC CAGAAGACCG TAGAATTAGC CAACGCCCTA
GGCGTAGAAG TTGAGAAAAG TGGATGA
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| Protein sequence | MKLLEATLNI VKARGEPLFL DVSRPYAYTL VAEINRERML IRIAQNAEDV SGSSIKDLKL
LSSYTNVTSL CITSTVRGEV LRRGVVYTRD NITFISLSTF TDLVDGKPPI FRLNHGSITA
AVDGKKLRQR REEAGISLGA LAKELGVSRE TVYRYEREEI EAPAKIAQKL IDMFGEDVIK
KISIDKVHVS AEELASRSLG KDTYKLVDSH PDALRVQDRV LFISTSADKF QKTVELANAL
GVEVEKSG
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