Gene Pcal_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0562 
Symbol 
ID4908477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp534028 
End bp534201 
Gene Length174 bp 
Protein Length57 aa 
Translation table11 
GC content56% 
IMG OID640124310 
ProductpaREP10 
Protein accessionYP_001055455 
Protein GI126459177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGGCG TACTCATGGC GTCGGTGTTA GAGTTGTTGG GGCCTCACGC CTACGGGCTT 
TGGAAATACG GCGTAGGCCC CACCGACGAC GTTGAAACAG CCATCATCAA GCTAAAAGCC
ACCGCCCCGC ACCTCGCCAA GTTCTTAAGC GAGATAGCGC AAAGGCGGTT TTGA
 
Protein sequence
MYGVLMASVL ELLGPHAYGL WKYGVGPTDD VETAIIKLKA TAPHLAKFLS EIAQRRF