| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0511 |
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| Symbol | |
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| ID | 4910048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 488022 |
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| End bp | 488729 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640124258 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001055405 |
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| Protein GI | 126459127 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAC TCGTCACAGG CGCCAACGGA GGCATAGGCT CAGCCCTCGT ACAGTTGGCC
AAGTCGAGAG GCGACTACGT GGTTGGAGTG TCGAGGACAC CCTCCACTGC TCATGTCACA
TACCAATGCG ATGTGTTAGA GGTCTCTTGC CTAAGCCGCG CCGCGGCGGA GGTCGGCCAG
CTAGACGGCA TAGCGGCCCT CCATGGCCAC GGCGATGCCG CGCTGTGGAA TAAAGGCCTA
GAGGAGCTGA CGGCAGACGA CTTCGTGGAG GTGTACAAAG TGGACGTGGC AGGCGCGTTC
AACGTCGTCA AGGCGTTTAG AAAAAACCTA AAGCCCACCT CCTCCCTCGT CTTCGTCTCC
TCAACGCCGG GCCTAGTGGG GGACGTGTAC GGGCTTCCGT ACGCCGCCGC AAAAGGCGCC
ATAGTGGCAT TGGTGAAAAG CTTGGCGAAA ATTCTAGCCC CCGTCAGAGT AAACGCTGTT
GCCTTTGGCC CAATTGAGAC GCGTTGGACT CAGTGGATCG CCGCAGAGGA GGTCGAAGAA
TTCAAAAGCC GCACGCTACT ACGCCGCATG GGCACGCCCG CCGAGGCCGC AGAGGCCATC
TACTGGCTGC TCAGCCCCGC GTCTTCATAC GTCACGGGGC AGGTAATAGT CGTAGATGGG
GGAGAGACCT TGGTAGGCCT ATACAGGCCA ACGCGGTCGC GGACGTAA
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| Protein sequence | MKILVTGANG GIGSALVQLA KSRGDYVVGV SRTPSTAHVT YQCDVLEVSC LSRAAAEVGQ
LDGIAALHGH GDAALWNKGL EELTADDFVE VYKVDVAGAF NVVKAFRKNL KPTSSLVFVS
STPGLVGDVY GLPYAAAKGA IVALVKSLAK ILAPVRVNAV AFGPIETRWT QWIAAEEVEE
FKSRTLLRRM GTPAEAAEAI YWLLSPASSY VTGQVIVVDG GETLVGLYRP TRSRT
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