| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0501 |
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| Symbol | |
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| ID | 4908698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 481151 |
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| End bp | 481891 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640124248 |
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| Product | thymidylate synthase, flavin-dependent |
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| Protein accession | YP_001055395 |
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| Protein GI | 126459117 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATTT TGGAGTCTCC GCGCGTTCGC CTTATTGGGG CTTGGGGCTC TGAGGCCCTC
GTGTCTGCGT TCACCGACAT GTTGTACCGC GGAGTGGAAC CAGAGGAGGC GCTCAAGGCG
CAGTCTGCCG ACGTAGTCGA GAGGAGGATA TCTGCGTTCT ACAGGCAGGG CCACTGGTCG
GTCTTCGAGT TCATGGGGGC ACAGTTCCTC GTGGAGTGCT CCCGCGCCTG CCACACCCAG
TTCATACGCC ACCGCCTAGC CTCATACTGG TCTGAGTCCC AGCGCTACGT TGATTACACA
AAGCGGGAGG TCAGATTCGT CGTGCCCAGG GGCTTCCCCG CAGACGTCCT GAAGAGGGCG
TACGAGGACT ACTTGGCGCT TAGGGGCCAG TACAAGCCGG AGTACGCGAG GATGGCCCTC
CCCAACGCCA CCGCTGTGCT GTTCGCAGTG CAAATGAACG CGAGGGAACT CCTCCTAAAC
TTCGTCCCAC TGAGGTGCGC CGCGACGGCC CAGGCGGAGA TACGCCACGT GTGTTGGCAG
ATTTTCGCCC ACGCGTGGCG CCTCTGGCCC ACCCTGGCTA AGCTGGTGTG GGAGGACTTG
CCCAACCTAC ACCGCGACTT CTGCACTAAG GTTCCCAAGG GGGCCGACTG CCGGGAGTAC
GCCATAAGAG ACGCCGAGGA GAAACACGGC CCACTGCCAG AGAAGCCGTG GCTCTATGCG
AGTCCTTATC AGAGGGCTTG A
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| Protein sequence | MFILESPRVR LIGAWGSEAL VSAFTDMLYR GVEPEEALKA QSADVVERRI SAFYRQGHWS
VFEFMGAQFL VECSRACHTQ FIRHRLASYW SESQRYVDYT KREVRFVVPR GFPADVLKRA
YEDYLALRGQ YKPEYARMAL PNATAVLFAV QMNARELLLN FVPLRCAATA QAEIRHVCWQ
IFAHAWRLWP TLAKLVWEDL PNLHRDFCTK VPKGADCREY AIRDAEEKHG PLPEKPWLYA
SPYQRA
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