| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0364 |
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| Symbol | |
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| ID | 4908789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 351416 |
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| End bp | 352177 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124116 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001055265 |
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| Protein GI | 126458987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGCTC TCCGCCTCTA CGCCTGGGTC CTCATAGCGG CGCTGTACGC CCCTGTCGCC
GTAATTTTGG CGCTCTCTTT CAATGCCAGC AAGCTCCCCT ACGTGTGGGG CGGCTTTACG
CTTAAGTGGT ACGAGTCCCT ATTCGCGTGG AGAGAGGCTT GGACGGCGCT TTTAAACAGC
GTCGTCATTG CGCTAGGCGT GGCCGCCGCC TCTGTGCTAC TCGGCGTCTT CATGGCCTAC
ACCCTACGCG GCGGGGGCTA CATAGTCCTC TCCCAAGGCG CCATAGTGAT GCCAGAGGTG
TCTGAGGCCT TGGCCTTCGC CGCGGCGCTC TTCGTGGTAA AACAGGCCAC GGGCATAGAC
TTGTACGGCC CCTTGGGAGT CTTCCTAGCC CACTTGGCCT TCGCCCTCCC TATGGCTCAC
GTAATGCTTG CGCCGTATGT GGCATATGTG TCGCGTAGCG TAGTGGAGGC CGCGAGAACG
CTCGGCGCCT CGGAGGCGCG CACCGCCTTT TCCGTGGTTA TGCCAATACT GGCGCCGGCC
CTTGTGGCAG TGTTTCTAAT AGTCTTCGCC AACTCCTTCG ACACCTACAT AAAAACAGCC
TTTACCACAA GCCCCGACTT TATCACAGCG CCGATACTCC TGTGGAACTA CGCCGCCAGA
GGCAGGGGAG ACCCCACAAT GTACGCCCTC ACGGCGTTCA TGCTAATCCC CTCCCTACTG
GCTGCGGTGA TATACTTTAG AGCTATAAAA AGGTACGGCT AA
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| Protein sequence | MRALRLYAWV LIAALYAPVA VILALSFNAS KLPYVWGGFT LKWYESLFAW REAWTALLNS
VVIALGVAAA SVLLGVFMAY TLRGGGYIVL SQGAIVMPEV SEALAFAAAL FVVKQATGID
LYGPLGVFLA HLAFALPMAH VMLAPYVAYV SRSVVEAART LGASEARTAF SVVMPILAPA
LVAVFLIVFA NSFDTYIKTA FTTSPDFITA PILLWNYAAR GRGDPTMYAL TAFMLIPSLL
AAVIYFRAIK RYG
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