| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0350 |
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| Symbol | |
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| ID | 4908741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 335940 |
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| End bp | 336866 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124102 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001055251 |
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| Protein GI | 126458973 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTTT TGTCTCCTAT GAAACTTGAG GGAGTTGTGG CGGCTACGGT TACCCCGTTT
TCTAAAGATG GGGTAAACTT CGAGGCGCTG AGGGCGCTGT TGGCTAAAGT GGCTGCCGAC
GGCTACCACC TATTTCCCAC CTCGTCGACG GGGGAGGTGA CTAAGCTCAC TGTGGAGGAG
CGGGTCAAGG TGATGGAGGT GGCCAAGGAG GTGGCCGGGG GGAGTGTCTA CGTGGTGGCT
GGCACGGGGA CGGGGGACCA CGTCTCCACT ATAGACATCA TAAGGCGGTA TAGAGACGTC
GGCGTCGACT TCGTCCTCAT AACCCCACCC TACTACATAC AGTACGACTG GGCGGCCATC
TACGCCTTCT ACAAGAAGGT CCTCGACAAG GTGGACGTCC CCGTAATTCT CTACACAATC
CCCCTCGCCG TGGGGTACAA CATACCTGTG GAAGTGTTTG AGCTCGTGGC CAATGAGTAC
AGCCAAGTGG TGGCGGTGAA GGACTCCTCT GGCGACTTCC GCTACCACCT AGACTTAATC
CACCTGCTTG GCAAAAGGCT GTCGATTCTC CAGGGGCTCG ACTTGTTGTT TGTCCCCTCC
CTCGTCATGG GGGCCCACGG CGGCATTTTG GCTGGGCCCA ACTTCCTCGG CAAGCTCACG
CTTAGGCAGT ACCAGCTGGT GAAAGAGGGG AAGGTGGCCG AGGCGGTGGA GCTTCACAAC
AGGCTTATGC CGCTGTGGAG GTTCATGGGC GGGTGTGGGC TAGTGGGGAA GCTCGGCGGC
AAGTGGCCCA CGCTCTACAA GGTGGCGGCG GAGATGGTGC ACGGCATCGA CATGGGCCCC
CCGCGGGAGC CCCTGCCCCC CATTGACGAC AAGGATAGAA AAGAGCTGGA GCGCCTTTTG
AGAGAGCTGG GGCTTGTAAA GCCTTAA
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| Protein sequence | MDVLSPMKLE GVVAATVTPF SKDGVNFEAL RALLAKVAAD GYHLFPTSST GEVTKLTVEE
RVKVMEVAKE VAGGSVYVVA GTGTGDHVST IDIIRRYRDV GVDFVLITPP YYIQYDWAAI
YAFYKKVLDK VDVPVILYTI PLAVGYNIPV EVFELVANEY SQVVAVKDSS GDFRYHLDLI
HLLGKRLSIL QGLDLLFVPS LVMGAHGGIL AGPNFLGKLT LRQYQLVKEG KVAEAVELHN
RLMPLWRFMG GCGLVGKLGG KWPTLYKVAA EMVHGIDMGP PREPLPPIDD KDRKELERLL
RELGLVKP
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