Gene Pcal_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0305 
Symbol 
ID4908444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp296712 
End bp297149 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content54% 
IMG OID640124055 
Producthypothetical protein 
Protein accessionYP_001055206 
Protein GI126458928 
COG category[S] Function unknown 
COG ID[COG3431] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGA TAAGGACCCT CCGCAGGGGG GAGTACATCG CCTACCTAAT TGTGCTAGGC 
CTCACCGCTG TTCTACTCGG CTTGTCAGTA TACCTGGCCG GGTACAGGCT TTACGAGCTT
GCAACAACGG CGGCCTCAAG TCCGGCGGCG CTGTCTCAGG CGATATACAA CGCGCTCTCC
GACGTCTTCC TAGTGGTTAT ATTCGTCGAG TTAATTGACA CCTTTGTCAC ATACTTGGAA
AAGAAGCGGC TAATAGTCTA CAGAATAATC GACGTGGCCT TGGTGGCCTT GGCGAGAGAG
CTCTTCATAT ACTTAGCGCC TGTAAACGCG GAGTTCAAAA TTGACAAAGG CGTTGCCCTA
ATATTGGCCA CGGCCGTCAT CGGCTTCGTG GACTACCTCC AGAGGAGGGG GATCACGCTT
GGGAGAAGGA GGCGGTAG
 
Protein sequence
MDVIRTLRRG EYIAYLIVLG LTAVLLGLSV YLAGYRLYEL ATTAASSPAA LSQAIYNALS 
DVFLVVIFVE LIDTFVTYLE KKRLIVYRII DVALVALARE LFIYLAPVNA EFKIDKGVAL
ILATAVIGFV DYLQRRGITL GRRRR