Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0305 |
Symbol | |
ID | 4908444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 296712 |
End bp | 297149 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640124055 |
Product | hypothetical protein |
Protein accession | YP_001055206 |
Protein GI | 126458928 |
COG category | [S] Function unknown |
COG ID | [COG3431] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTGA TAAGGACCCT CCGCAGGGGG GAGTACATCG CCTACCTAAT TGTGCTAGGC CTCACCGCTG TTCTACTCGG CTTGTCAGTA TACCTGGCCG GGTACAGGCT TTACGAGCTT GCAACAACGG CGGCCTCAAG TCCGGCGGCG CTGTCTCAGG CGATATACAA CGCGCTCTCC GACGTCTTCC TAGTGGTTAT ATTCGTCGAG TTAATTGACA CCTTTGTCAC ATACTTGGAA AAGAAGCGGC TAATAGTCTA CAGAATAATC GACGTGGCCT TGGTGGCCTT GGCGAGAGAG CTCTTCATAT ACTTAGCGCC TGTAAACGCG GAGTTCAAAA TTGACAAAGG CGTTGCCCTA ATATTGGCCA CGGCCGTCAT CGGCTTCGTG GACTACCTCC AGAGGAGGGG GATCACGCTT GGGAGAAGGA GGCGGTAG
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Protein sequence | MDVIRTLRRG EYIAYLIVLG LTAVLLGLSV YLAGYRLYEL ATTAASSPAA LSQAIYNALS DVFLVVIFVE LIDTFVTYLE KKRLIVYRII DVALVALARE LFIYLAPVNA EFKIDKGVAL ILATAVIGFV DYLQRRGITL GRRRR
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