| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0272 |
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| Symbol | |
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| ID | 4908765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 267423 |
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| End bp | 270230 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640124024 |
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| Product | CRISPR-associated Cmr2 family protein |
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| Protein accession | YP_001055175 |
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| Protein GI | 126458897 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02577] CRISPR-associated protein, Crm2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTGC GCGAGTTCTT TTTGACAAAG GCGTACGCCC TCTTCCACGA CCCGCCCGAC
AAAATGTGGG GGCTAAAGGG CCACGAGGAG CGGGCCTGGG ACATGTTCAA CAAGGTGCGC
CGCGGGAGCC CGCTAGACGG CGAACTGCCG GAGTGGGCGA GGGAGGTGGT CAAGCTGGCG
GACCGCATGG CCGCCTCCAT GGACAGATAC GCCTTCTACT CGGGGGGCGG GGAGGGCGTG
AAGTACGACA AGCTCCACAA CCTCTTCAAC CCACGCCTGT GGCGCGCCCT CGCGCCGCCG
GACCCGGGGA AAGTCGCCGA GTACGTCGAG AATCTGGGCG GCCGAGTGAG GGCGGCTAAG
GGGCCTAGAG AGGCGTACCA CGTCCTCTAC GCCCTATTCG AGGCCCTGTG GATTGACGAG
GGGCTTGGGC CAAGCCTCGC AGACCCGAGG GCCCCCACCC ACGACGTGTT TGACCACTTG
TACGCGACGG CCATGGTGGC CAACTGGCTC CTCGCCGGGG GCAAGCCCTC CGGCTACTTC
GTCACCTTAG ACGTGCCGGG GGTGCAAGAC TTCGTCAAGG CTGGGAGAAA GGCCGGCGAC
ATTTGGGCAG GTAGCTGGGC CTTGTCCATG GCGGTGTGGC TCACCGTGTG GCCCTTTGCC
TGGGAGTACG GCCCCGACGT GCTCCTGAGG CCCACGGCGA GGCTCAACCC CTACTACTAC
GCCTTCGCCG CCGCCCGGGG GCTGGGGGTG GAACACGGCG TCTTTGCCAA ATTGCTGTCC
CCCTACGTCA AAGGAGAGTC GTTTTACGAC TTGGTCAACT TTGCCGTTGT CCAGCCGCTG
ATTGGGGAGA GGGCCCAGAT TGTCCTGCCG CCGTACCGCG TCGAGGGGGA CAAAATTGCC
AGCTGGGGCG GGGCCGAGGA GGTGAGAGAG GCTGTCCGAG ACAGGTTCAA GAGGGCCGTC
GAGTGTCTAA CCCATTTCGC AAAGGGGCAA CGGGGCGCGG GGGATGAGTA CTGCGAAGAC
TTCTTCAAAG TGGTAGAGGA GGGGCGCGGA GAGGGAAGAG GCGGAGGCGA GGTGGAAAAA
ATTGCGGCAT GGTTGCAGAA GTACGCAGAG CTTAGGCTCC CGCTGAGAGT GGAGGTGGTG
GACGTCGGCG CTGTGTATGA CAGCATAAAG TGTCCAAGGG AGGTGGCGAA GGCCATAGAA
GAGGCGTTGG GGGACGGCGA GGAGCGCTGC AAAATCCTCT TCCTCTTCGA CGCCGTATTG
AGAGGGGGGA GGGAGGGGAC AAAGCTCGTG GAACCCCAGA GGCGCAGGTT CATCCCCACG
CGAGGCCCCT GGTTTAAGCC GGGCGGATAC GACGACCTCA ACCCCCACTT CAACTTCCCA
CTAGACCCAA ACTGGAGGGT CTGTAGTCTC TGCGGCTCTG AGCCCGCCGT CGTCGGAGTG
AGGAAGGTGG CGAGGGAGGG GAGGGAGGAC TACAACGAGG AGGACTTGAG GCGGATATCT
GCAGAAGTGG GGATAGAAGT GAGTAGACTG AAGAACCACT TGCGCAAAGT GTTGCGGCCC
GGCGAGTACC TAGGCCCAGT GTGCTTGGCC AAGAGGCTGA TATACCTCAG AGCCGCCGAC
CGGGAGCTCA TAAAATTTGA AAGCACAGAG GACGTGGCAG TGGTAAAGCT GGCTGAGAGT
CACGAGCAAC ACTATGCAGA GTTAGATAGA GTACAGGAGT GTGTTAAGGT GGTCAACTAT
TTGAGGACAA CGGGGGGCAG AGACCTTGAG GTCATTTGGG GAAACCCAGA GGCCATGAGA
CGGGACTGGG ACAACTGCTT TAAAAAATTC GGCAGGCTCC GGGGGGTAGA GAGACTCGTG
AGAGAGATCT TTGGCGTAGA GGGGGACGTG GGGAAGGCTG TTGAGGAGTT CGCGGGCCCC
AGGCTCTTCT ACGCGGTGGT GAGGGCGGAC GGGGACAGCG TTGGGAAGTT GCTGGAGGGC
CACCTCCCGG TCAACTGGTA TGGGGCGGTG GCGGAGGTGG TGGAAGGCGT GGGGGCGGAG
GGCCGCGAGA AGGCGCTGGA GGTGCTCCGC GCCGTAGAAG AGCACATGCG CTCCTTCGGC
GTGCCGCCCC CCGTGGTGAT TACCCCCACC TACCGCGTGG CGGTGAACCG CGCCATGGTG
CTCACCTCGC TGAAGGACTT GGCCACCACG GAGAAGCACC GCGGCCTGTT GATATACGCC
GGCGGCGACG ACGTAGTGGC GCTGTTGCCC GTGGAGACTG CGCTAGACGC CGCCGCGGAG
TACAGAGAGA ACTACTGGGG AGAAGGGGGC TTCCACATTG TGGACAACTA CCCCGTGCCA
GCCCTGGCGG CGTATGGGAG AAGCACGGCG GTGCGCTTCG TCCACCTAAT GGACCTAATG
TCTGAGGAGC TTGGGAAGTC CTACCACGAC CTAGAGCACT TGGCCAAAGG GGGCAGGTGG
GACTGCTTTG AAAAAGACTC CCTTACGATC ACCAGCTCGA GGGTTGAGGC AAAGGCGGTC
CTCCCCTTTA GGCGGCCCAG AGAGGCCGTG GAGAGGCTGA AGGAGCTCTG GCTCCTCATG
GCCCTTGGGC GCCTCAGCAA GAACGCGCCC CACGACCTCG ACGCCTACGA GGATCTGAAG
AGGGACTTAG CCGCGTATTT AAAGGCGTGG CGCTACGCCC TAAAGAGAAA CGCCAGGGAG
CTCTCCCCCG AGACTCTAAC CCGCCTCCTC TGCTTCATTG AGAAATACGG CGCAGAGGCA
GGCGAGGGGC TGAAAGAGGC CATGAAGATA CTCAGGAGGT TGCCATGA
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| Protein sequence | MDLREFFLTK AYALFHDPPD KMWGLKGHEE RAWDMFNKVR RGSPLDGELP EWAREVVKLA
DRMAASMDRY AFYSGGGEGV KYDKLHNLFN PRLWRALAPP DPGKVAEYVE NLGGRVRAAK
GPREAYHVLY ALFEALWIDE GLGPSLADPR APTHDVFDHL YATAMVANWL LAGGKPSGYF
VTLDVPGVQD FVKAGRKAGD IWAGSWALSM AVWLTVWPFA WEYGPDVLLR PTARLNPYYY
AFAAARGLGV EHGVFAKLLS PYVKGESFYD LVNFAVVQPL IGERAQIVLP PYRVEGDKIA
SWGGAEEVRE AVRDRFKRAV ECLTHFAKGQ RGAGDEYCED FFKVVEEGRG EGRGGGEVEK
IAAWLQKYAE LRLPLRVEVV DVGAVYDSIK CPREVAKAIE EALGDGEERC KILFLFDAVL
RGGREGTKLV EPQRRRFIPT RGPWFKPGGY DDLNPHFNFP LDPNWRVCSL CGSEPAVVGV
RKVAREGRED YNEEDLRRIS AEVGIEVSRL KNHLRKVLRP GEYLGPVCLA KRLIYLRAAD
RELIKFESTE DVAVVKLAES HEQHYAELDR VQECVKVVNY LRTTGGRDLE VIWGNPEAMR
RDWDNCFKKF GRLRGVERLV REIFGVEGDV GKAVEEFAGP RLFYAVVRAD GDSVGKLLEG
HLPVNWYGAV AEVVEGVGAE GREKALEVLR AVEEHMRSFG VPPPVVITPT YRVAVNRAMV
LTSLKDLATT EKHRGLLIYA GGDDVVALLP VETALDAAAE YRENYWGEGG FHIVDNYPVP
ALAAYGRSTA VRFVHLMDLM SEELGKSYHD LEHLAKGGRW DCFEKDSLTI TSSRVEAKAV
LPFRRPREAV ERLKELWLLM ALGRLSKNAP HDLDAYEDLK RDLAAYLKAW RYALKRNARE
LSPETLTRLL CFIEKYGAEA GEGLKEAMKI LRRLP
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