| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0246 |
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| Symbol | |
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| ID | 4909059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 244694 |
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| End bp | 245839 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640123998 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_001055149 |
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| Protein GI | 126458871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.189585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAGT TTCCCCTACT GCTGCATGTT GGATACTTCG CCACAGCGGG CGTAGGGATT
CCCCCGGTGT CCGCGGCTAG GGCTGTCGCT GAGTACGTTC AACTTGCTGT GGAGGACCCT
GAGGAGGCCG TGGCCGCGGC TGGAAAAGCG GCCGAAGTCG CCCGCACGGC TTTTGCCGAG
CTGATTGGCG CATCCCCCGG CGAGGTGGCC GTGGCTGGGC CAGGCACACT CGCCGCATTG
GAGAGGGCCC TCACGGCGGT GGGGTGCAGC GCTGGGAGAA ACGTTGTGAC TGACGACCTC
GAGTACCCAG GCCTCTTGAA CCTCGTCGCC ACCTTCGCCA GCCGCTGCGG CTACGAGCTG
AGAGTCGTGC GCCACAGAGA GGGCCAGCTC TCCCTCGACG AGTTTAAGAG GGCCGTGGAC
GGCGAGACGG CGGCCGTTGT GGTAAGCTCT GTCCAGTGGA TTAACGGCGT CCGCCTCGAC
GTAGACGCCC TGAGCGAGCT TGTGGAGAGG ACCGGCGCCT TTCTCATCGT GGACGGGATA
CAGGAAGCCG GCGTCAGGCA GCCGGCGCTT AAGAGGGTGG ACTTCTACGC CGCCGGCACC
CAGAAGTGGC TCATTGCTCC ATTCGGCGCC GCCCTGACCT ACGTGGGCCC CCGCATGGCG
GAGAGGCAGT CCCTGCTGAG CGTAAACAAC GCCGAGATGG ACGTCTCGCC AGAGGCCTAC
TTCGCCGACG GGGAGAAGAC CCCAGAGAGG CTGGGCCTCT CCAAGCCCAG GGGGGCTAAG
AGCTTCGAGT TGCCGGGGAT GGGGCCGGCG GCGGGGGTTG TGGGCGCCGC GGCGGCGCTC
AGCTACTTGG CTAAGGTGGG AGACGTGGAG GCTAGGGTGA GGCGGCTGAG AGACGCTGTG
TGGAGGGCCT TGGAGGAGGG CGGCCTAAAG GTGTTGACCC CAGAGGAGGC CGACTGGAGC
GGCATCGTTC TCGCCACCAC CGGGGCGCGG AGGGGAGACG AGGAGCTCTA CTGCAGATTG
AGGGAGGAGG GGTTTAGGCT CCACCTAAGG GGCATGTCAG GCGTGGCCGG GCTCAGGTTC
TCGGCCCACT TCTACGTGGA CGAGACGTGG GTCGACAGAC TGGCCGCCGT CTTGAGGCAG
CGCTAG
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| Protein sequence | MDEFPLLLHV GYFATAGVGI PPVSAARAVA EYVQLAVEDP EEAVAAAGKA AEVARTAFAE
LIGASPGEVA VAGPGTLAAL ERALTAVGCS AGRNVVTDDL EYPGLLNLVA TFASRCGYEL
RVVRHREGQL SLDEFKRAVD GETAAVVVSS VQWINGVRLD VDALSELVER TGAFLIVDGI
QEAGVRQPAL KRVDFYAAGT QKWLIAPFGA ALTYVGPRMA ERQSLLSVNN AEMDVSPEAY
FADGEKTPER LGLSKPRGAK SFELPGMGPA AGVVGAAAAL SYLAKVGDVE ARVRRLRDAV
WRALEEGGLK VLTPEEADWS GIVLATTGAR RGDEELYCRL REEGFRLHLR GMSGVAGLRF
SAHFYVDETW VDRLAAVLRQ R
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