| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0240 |
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| Symbol | |
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| ID | 4909558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 237510 |
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| End bp | 238859 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640123992 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001055143 |
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| Protein GI | 126458865 |
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| COG category | [H] Coenzyme transport and metabolism
[S] Function unknown |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG1992] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.180045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAGGG TGGCCATAAC CATAGCTGGC CTGGACTCGG GGGGTGGGGC TGGCGTCCAC
GCCGATGTTA AAACCTTCGC CGCGTTGGGT GTCCACGGGG CCACTGCGCT GACCTGCGTC
ACTGCACAGA ACACCTACGA GGTTAGGAGG GCTGAGTGCC TCGACCCCGG CCTCGTCCGG
GAGCAGATCA TGGCGGTGTG GGACGACATG GGGATAGACG CTGGAAAGAC TGGGATGCTG
GGGACTAGGG GGATTATAGA GGAGGTGGCG GCCACGGTCT CCAAGCTGGG GTTCCCCCTG
GTGGTAGACC CGGTGATGGT GGCAAAGTCT GGGGCTCCCC TCATTGCCGA AGACGCCATG
GAGGCGCTTG CCAAGAGGCT CCTCCCCGTG GCAAAGGTGG TGACGCCCAA TAGGTATGAG
GCAGAGAGGC TGACGGGTAT GCGGATATCC TCCGTAGAGG ACGCCAAGAG GGCGGCTGAG
TATATACACA GGGAGCTGGG CGCCGAGGTC GTCGTAGTAA AAGGCGGCCA CTTGGACGCG
CCGGAGGCAG TGGACGTGGT GTACGTGGGG GGCACGTTCC ACGAGCTGAG GGCACCTAGG
CTAAACTCCA GGGCGACGCA CGGCACTGGC TGCTCCTTCT CAGCGGCCAT AGCCGCGGGG
CTGGCAAAGG GGCTCGCCCC GCTGGAGGCC ATTAAGACGG CCAAGGAGCT AATTACCACA
GCCATTAAGT ACGGTGTGGC CAGGGGAAAG GGACACTGGG CCGTCAACTC CACAGCGTGG
GTGGAGATAC CGGCGGAGAG GTGGAGGGCC TACGAGGCCA TGTCTGCGGC GCTTAGGGCG
CTTGAGGAGA GGGGGGCCGA GGTGGCTAGG TACATACCAG AGGTGCAGAG CAACTTAGGC
TACGCCATAG ACCCCAGGTA CGCCTCTGGG CGCGGAGACG TGGCGGCTGT GCCGGGGAGG
ATTGTGAACT ACATGGGCAA GGCGAGACCC TCGGGGCCTC CCACCTTCGG CGCCAGCGAC
CACGTGGCTA GGAAGATACT GGCCGCCATG GGGAAAGACC CGCGGATTCG CAGCGCCATG
AACATCCGCC TAGACTGGGG CCTTGTGGAG AAGGCAAAGG CCTTGGGCAT GGCGGTGGCC
GTGGTAGATA GGCGCAACGA GCCGGAGGAG GTGAAGGCTA GGGAGGGGGG CTCCATGCAG
TGGGTTGTGG AGGAGGCGTT TAGGCAGACC GGCGGGAGGG CGCCCGACTT AATCGTCGAC
GTGGGAGACT GGGGCAAAGA GCCGATGATC ACCATCTTGG GGAGAGACCC CCTAGACGTT
TTAGAAAAAC TATTCAAGTT AATCACGTGA
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| Protein sequence | MWRVAITIAG LDSGGGAGVH ADVKTFAALG VHGATALTCV TAQNTYEVRR AECLDPGLVR
EQIMAVWDDM GIDAGKTGML GTRGIIEEVA ATVSKLGFPL VVDPVMVAKS GAPLIAEDAM
EALAKRLLPV AKVVTPNRYE AERLTGMRIS SVEDAKRAAE YIHRELGAEV VVVKGGHLDA
PEAVDVVYVG GTFHELRAPR LNSRATHGTG CSFSAAIAAG LAKGLAPLEA IKTAKELITT
AIKYGVARGK GHWAVNSTAW VEIPAERWRA YEAMSAALRA LEERGAEVAR YIPEVQSNLG
YAIDPRYASG RGDVAAVPGR IVNYMGKARP SGPPTFGASD HVARKILAAM GKDPRIRSAM
NIRLDWGLVE KAKALGMAVA VVDRRNEPEE VKAREGGSMQ WVVEEAFRQT GGRAPDLIVD
VGDWGKEPMI TILGRDPLDV LEKLFKLIT
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