| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0227 |
|---|
| Symbol | |
|---|
| ID | 4909407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 228302 |
|---|
| End bp | 228724 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640123979 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001055130 |
|---|
| Protein GI | 126458852 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2835] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0863443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACA GGCTGATGGA CGTCCTCGCC TGCCCCTACG ACAAGACCTT CCCCCTAAGG
CTGGTGGTCT TAAAGAGGCG GGAGTACCCC GAGCGGCAGT ACACATGGCC CCGCAAGCCA
TTCTGCGAGG AGTACTGCGC CTACCGCGAC TTAAAGATAA AGGACCACCC AAAGCCAGAC
ACACTGCCCT GCGAGGAGTG CCACAAGTGG GAAATTGAGG CGGGGGTCAT ATACTGCCCC
ACCTGCGGGA GGTGGTACCC CATAATAGAG GAGATCCCCA GGATGTTGCC AGACGAGTTG
CGCAACGAGA AGGAGGAGCT GGAGTTCCTC CGCTCAGTGG CAGAGGACTT GAAGAAGGCG
GCGCCAGACA TCGCCGAGAA GATACTACAA CAGGGAAAGC CCTTCAACCT ATCCACAAAG
TAG
|
|---|
| Protein sequence | MKYRLMDVLA CPYDKTFPLR LVVLKRREYP ERQYTWPRKP FCEEYCAYRD LKIKDHPKPD
TLPCEECHKW EIEAGVIYCP TCGRWYPIIE EIPRMLPDEL RNEKEELEFL RSVAEDLKKA
APDIAEKILQ QGKPFNLSTK
|
|---|
| |