| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0213 |
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| Symbol | |
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| ID | 4909387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 213108 |
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| End bp | 215330 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640123965 |
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| Product | elongation factor EF-2 |
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| Protein accession | YP_001055116 |
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| Protein GI | 126458838 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G
[TIGR00490] translation elongation factor aEF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.551385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTG CTGTCAGGAT TGTGGAGAAG CAGTTGGATG AGATTCTGGC TATTGCGAGG
AACCCGGCGC AGATTAGGAA CGCGGGCACT TTGGCGCATG TGGACCACGG GAAGACCACA
ACCACCGACT CTCTGCTCAT GGGTGCTGGC CTTCTGTCGC CTAAGGTGGC GGGTAAGGCC
TTGGCGATGG ACTACGTGCC TATTGAGCAG TTGCGCCAGA TGACGGTTAA GGCGGCTAAC
ATCTCGCTGT ACTTCGAGTA TGGGGGTAAG CCCTACTTGA TCAACTTCGT CGATACGCCG
GGCCACGTGG ACTTCACTGG CCACGTCACT AGGTCGCTGA GGGTCATGGA TGGGGGGCTT
GTGGTAGTGG ACGCCGTGGA GGGGGTTATG ACGCAGACGG AGACTGTGGT GAGGCAGGCT
CTGGAGGAGT ACGTGAGGCC TGTCCTCTTT ATAAATAAGA TCGACCGCCT TATCAAGGAG
CTCAGGCTCT CGCCTCAGGA GATACAGCAG CGGATATTGT CAATTGTCAA AGACTTCAAC
GCGTTGATCG ACATGTTTGC CCCGCCTGAG TTTAAAGACA AGTGGAAGAT TGACCCCGGG
AAGGGCCAGA TGGCGATGGG CTCGGCGTTG CACAAGTGGG GCATCACGAT CCCCATGGCG
CAGAAGGCTG GGATTAAGTT CAGCAACATT GTGGACGCCT ATGAGAAGGG CTATGTGGAC
AAGCTTGCTG AGGAGTTCCC CTTGTACAAG ACCCTCCTCA CTATGATCAT TGAGCACGTG
CCTCCGCCGA ACGTGGCGCA GAAGTATAGA ATTCCCAGGC TTTGGCGCGG CGACTTGAAC
AGCGAGGTGG GCAAGGCCCT CCTCGAGGCT GATCCAAACG GCCCCACAGT CATCGCGGTG
AGCAAGGTTA ACAAGGACCC GCACGCCGGC TTAATTGCCA CGGGCCGCGT CTTCTCTGGC
ACAATTAGGG AGGGCGACGA GATCTACATA ATTGGCAGGA AGATGAAGAA GAAGGTTCTC
CAGACCTACA TCTACATGGG CCCCACGAGG ATCATCGTCC CCTATATGCC CGCGGGCAAC
ATAGTGGCGC TCATGGGCGT AGACGAGGCG AGGGCAGGCG ACACCCTCGT CACGCCCTCT
CTCGCGGATA TACCGCCCTT CGAGAGGATG AGGTACATAT CTGAGCCCGT GGTGACCGTG
GCTATCGAGC CCAAGAACCC CGCCGAGTTG GCCCGCCTCG TCGAGGCTTT GAAGGACTTG
GTAATCGAAG ACCCCACCCT CGACCTCAAG ATTGACCAGG AGACTGGGCA AATACTCCTA
TCGGGCGTTG GCACCCTCCA CTTGGAGATA GCAACGTGGT TGCTCAAGGA GAGGACTAAG
GTTGAGTTCT CAGTGTCGCC GCCGTTGATA CGCTTCAGAG AAACGGTGAG AGAGAGGTCG
CAGGTCTGGG AGGGCAAGTC GCCGAATAAG CACAACCGCC TCTACTTCTA CGTCGAGCCC
CTCGACGAGA CCACCGTCGA GCTGATCGCC ACGAGGGAGA TCACAGAGGA GCAAGACCCC
AGGGAGAGGG CGAAGATCCT CAGAGAGAAG GCCGGCTGGG ACACAGACGA GGCCAGGGGA
GTCTGGGCCA TCGACGACAG GTACTTCAAC GTAATTGTGG ACAAGACCAC CGGTATCCAG
TACTTGAGAG AGATTAGGGA CTACATCATA CAGGGCTTTA GGTGGGCCAT GGAGGCCGGG
CCGCTGGCGC AGGAGCCCAT AAGAGGCGTA AAAGTCGTCT TGGTGGACGC GGTGGTGCAC
GAAGACCCTG CCCACCGCGG ACCGGCGCAG ATTATGCCGG CGACAAAGAA CGCCATCTTC
GCCGCCTTCC TCTCCGCCAG GCCCACTATA TTGGAGCCGC TGGTTAGGCT AGACATCAAG
GTGGCCCCCG ACTATATCGG CGCGGTTACG TCTGTGATAA ACAAGCACAG GGGTAAAATC
CTCGACATGA CGCAGCAGGA GTACATGGCG TTTCTAAGGG CCGAACTGCC CGTGTTGGAG
TCTTTCACAA TAAGCGACGA GCTCCGCGCC GCTGCGGCTG GGAAGATCTT CTGGTCAATG
CAGTTCTCCA GGTGGGCGCC GTACCCAGAG TCCATGCTCG CGGACTTCGT AAAACAGCTC
CGGAAGAAGA AGGGGCTGAA GGAGGAGATA CCGAAGCCCA CGGACTTCGT TGAGGCTTTT
TAG
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| Protein sequence | MSSAVRIVEK QLDEILAIAR NPAQIRNAGT LAHVDHGKTT TTDSLLMGAG LLSPKVAGKA
LAMDYVPIEQ LRQMTVKAAN ISLYFEYGGK PYLINFVDTP GHVDFTGHVT RSLRVMDGGL
VVVDAVEGVM TQTETVVRQA LEEYVRPVLF INKIDRLIKE LRLSPQEIQQ RILSIVKDFN
ALIDMFAPPE FKDKWKIDPG KGQMAMGSAL HKWGITIPMA QKAGIKFSNI VDAYEKGYVD
KLAEEFPLYK TLLTMIIEHV PPPNVAQKYR IPRLWRGDLN SEVGKALLEA DPNGPTVIAV
SKVNKDPHAG LIATGRVFSG TIREGDEIYI IGRKMKKKVL QTYIYMGPTR IIVPYMPAGN
IVALMGVDEA RAGDTLVTPS LADIPPFERM RYISEPVVTV AIEPKNPAEL ARLVEALKDL
VIEDPTLDLK IDQETGQILL SGVGTLHLEI ATWLLKERTK VEFSVSPPLI RFRETVRERS
QVWEGKSPNK HNRLYFYVEP LDETTVELIA TREITEEQDP RERAKILREK AGWDTDEARG
VWAIDDRYFN VIVDKTTGIQ YLREIRDYII QGFRWAMEAG PLAQEPIRGV KVVLVDAVVH
EDPAHRGPAQ IMPATKNAIF AAFLSARPTI LEPLVRLDIK VAPDYIGAVT SVINKHRGKI
LDMTQQEYMA FLRAELPVLE SFTISDELRA AAAGKIFWSM QFSRWAPYPE SMLADFVKQL
RKKKGLKEEI PKPTDFVEAF
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