Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0213 |
Symbol | |
ID | 4909387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 213108 |
End bp | 215330 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640123965 |
Product | elongation factor EF-2 |
Protein accession | YP_001055116 |
Protein GI | 126458838 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G [TIGR00490] translation elongation factor aEF-2 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.551385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCTG CTGTCAGGAT TGTGGAGAAG CAGTTGGATG AGATTCTGGC TATTGCGAGG AACCCGGCGC AGATTAGGAA CGCGGGCACT TTGGCGCATG TGGACCACGG GAAGACCACA ACCACCGACT CTCTGCTCAT GGGTGCTGGC CTTCTGTCGC CTAAGGTGGC GGGTAAGGCC TTGGCGATGG ACTACGTGCC TATTGAGCAG TTGCGCCAGA TGACGGTTAA GGCGGCTAAC ATCTCGCTGT ACTTCGAGTA TGGGGGTAAG CCCTACTTGA TCAACTTCGT CGATACGCCG GGCCACGTGG ACTTCACTGG CCACGTCACT AGGTCGCTGA GGGTCATGGA TGGGGGGCTT GTGGTAGTGG ACGCCGTGGA GGGGGTTATG ACGCAGACGG AGACTGTGGT GAGGCAGGCT CTGGAGGAGT ACGTGAGGCC TGTCCTCTTT ATAAATAAGA TCGACCGCCT TATCAAGGAG CTCAGGCTCT CGCCTCAGGA GATACAGCAG CGGATATTGT CAATTGTCAA AGACTTCAAC GCGTTGATCG ACATGTTTGC CCCGCCTGAG TTTAAAGACA AGTGGAAGAT TGACCCCGGG AAGGGCCAGA TGGCGATGGG CTCGGCGTTG CACAAGTGGG GCATCACGAT CCCCATGGCG CAGAAGGCTG GGATTAAGTT CAGCAACATT GTGGACGCCT ATGAGAAGGG CTATGTGGAC AAGCTTGCTG AGGAGTTCCC CTTGTACAAG ACCCTCCTCA CTATGATCAT TGAGCACGTG CCTCCGCCGA ACGTGGCGCA GAAGTATAGA ATTCCCAGGC TTTGGCGCGG CGACTTGAAC AGCGAGGTGG GCAAGGCCCT CCTCGAGGCT GATCCAAACG GCCCCACAGT CATCGCGGTG AGCAAGGTTA ACAAGGACCC GCACGCCGGC TTAATTGCCA CGGGCCGCGT CTTCTCTGGC ACAATTAGGG AGGGCGACGA GATCTACATA ATTGGCAGGA AGATGAAGAA GAAGGTTCTC CAGACCTACA TCTACATGGG CCCCACGAGG ATCATCGTCC CCTATATGCC CGCGGGCAAC ATAGTGGCGC TCATGGGCGT AGACGAGGCG AGGGCAGGCG ACACCCTCGT CACGCCCTCT CTCGCGGATA TACCGCCCTT CGAGAGGATG AGGTACATAT CTGAGCCCGT GGTGACCGTG GCTATCGAGC CCAAGAACCC CGCCGAGTTG GCCCGCCTCG TCGAGGCTTT GAAGGACTTG GTAATCGAAG ACCCCACCCT CGACCTCAAG ATTGACCAGG AGACTGGGCA AATACTCCTA TCGGGCGTTG GCACCCTCCA CTTGGAGATA GCAACGTGGT TGCTCAAGGA GAGGACTAAG GTTGAGTTCT CAGTGTCGCC GCCGTTGATA CGCTTCAGAG AAACGGTGAG AGAGAGGTCG CAGGTCTGGG AGGGCAAGTC GCCGAATAAG CACAACCGCC TCTACTTCTA CGTCGAGCCC CTCGACGAGA CCACCGTCGA GCTGATCGCC ACGAGGGAGA TCACAGAGGA GCAAGACCCC AGGGAGAGGG CGAAGATCCT CAGAGAGAAG GCCGGCTGGG ACACAGACGA GGCCAGGGGA GTCTGGGCCA TCGACGACAG GTACTTCAAC GTAATTGTGG ACAAGACCAC CGGTATCCAG TACTTGAGAG AGATTAGGGA CTACATCATA CAGGGCTTTA GGTGGGCCAT GGAGGCCGGG CCGCTGGCGC AGGAGCCCAT AAGAGGCGTA AAAGTCGTCT TGGTGGACGC GGTGGTGCAC GAAGACCCTG CCCACCGCGG ACCGGCGCAG ATTATGCCGG CGACAAAGAA CGCCATCTTC GCCGCCTTCC TCTCCGCCAG GCCCACTATA TTGGAGCCGC TGGTTAGGCT AGACATCAAG GTGGCCCCCG ACTATATCGG CGCGGTTACG TCTGTGATAA ACAAGCACAG GGGTAAAATC CTCGACATGA CGCAGCAGGA GTACATGGCG TTTCTAAGGG CCGAACTGCC CGTGTTGGAG TCTTTCACAA TAAGCGACGA GCTCCGCGCC GCTGCGGCTG GGAAGATCTT CTGGTCAATG CAGTTCTCCA GGTGGGCGCC GTACCCAGAG TCCATGCTCG CGGACTTCGT AAAACAGCTC CGGAAGAAGA AGGGGCTGAA GGAGGAGATA CCGAAGCCCA CGGACTTCGT TGAGGCTTTT TAG
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Protein sequence | MSSAVRIVEK QLDEILAIAR NPAQIRNAGT LAHVDHGKTT TTDSLLMGAG LLSPKVAGKA LAMDYVPIEQ LRQMTVKAAN ISLYFEYGGK PYLINFVDTP GHVDFTGHVT RSLRVMDGGL VVVDAVEGVM TQTETVVRQA LEEYVRPVLF INKIDRLIKE LRLSPQEIQQ RILSIVKDFN ALIDMFAPPE FKDKWKIDPG KGQMAMGSAL HKWGITIPMA QKAGIKFSNI VDAYEKGYVD KLAEEFPLYK TLLTMIIEHV PPPNVAQKYR IPRLWRGDLN SEVGKALLEA DPNGPTVIAV SKVNKDPHAG LIATGRVFSG TIREGDEIYI IGRKMKKKVL QTYIYMGPTR IIVPYMPAGN IVALMGVDEA RAGDTLVTPS LADIPPFERM RYISEPVVTV AIEPKNPAEL ARLVEALKDL VIEDPTLDLK IDQETGQILL SGVGTLHLEI ATWLLKERTK VEFSVSPPLI RFRETVRERS QVWEGKSPNK HNRLYFYVEP LDETTVELIA TREITEEQDP RERAKILREK AGWDTDEARG VWAIDDRYFN VIVDKTTGIQ YLREIRDYII QGFRWAMEAG PLAQEPIRGV KVVLVDAVVH EDPAHRGPAQ IMPATKNAIF AAFLSARPTI LEPLVRLDIK VAPDYIGAVT SVINKHRGKI LDMTQQEYMA FLRAELPVLE SFTISDELRA AAAGKIFWSM QFSRWAPYPE SMLADFVKQL RKKKGLKEEI PKPTDFVEAF
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