| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0199 |
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| Symbol | |
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| ID | 4908738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 198141 |
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| End bp | 199358 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640123951 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001055102 |
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| Protein GI | 126458824 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCG AACTGTCTAG GGAGGATAGG CTTTTTCTCG AGTCTGTGAA AAGCTTCGCT
GAGAGGGTCA TTGCGCCTAG GTGGGTTGAC TTGGACGAGG GGAAGTGGCC TATTGAGGAG
GCGGCGGCTA GGCTGGGGGA GGCGGGGCTG TTGGGGATTC CCCTCAGCTC TAAGTACGGC
GGGCAGGATG GGACCTTCCT CCAGGCGGCT TTGGCTGTGG AGGAGTTGGC CTATGCCGAC
CCCTCGCTGG CTGTGCCGGT GTACGTGCTT TTGGAGACTG CGTGGCCGTA CATGGTTCAG
CGGTATGGGA GAGAGGAGGC GAAGGAGGAG GTTCTGCCGG AGGTGGCCAG GGGGCGGGCG
TTTGTGGGCA TTGGGTCCAC GGAGCCGCAG GGGGGCAGCG ACGTGGCTTC TGTGGTCACG
AAGGCGGTGA AGGAGGGCGA CTTGTGGAAG CTCTACGGGG AGAAGAACAT GGTCACTGGC
GTGGCTACGA TTTTGAATCT CCCGTACGGC GGGGGGGTGG TGGCTATTAC GAGGACGGGG
AGGGTGGAGG ACAAGCACAG GGGGATTACC ACGTTTTTGG CGTTGTTGAA GAGGAGGGGG
AGGGTCACCC CCGGGTTTAC GCATAGGGAC TGGGACGAGA TTGGCAGACA CGGCTTGCCC
ACGGGGTACT TGACCCTAGA GGGCCTGCCC GTGGAGGAGG TGTTTATGCT TGGGGAGCTG
AACGGCGGGT TTAAGGTGGC GATGGAGGGG TTCAACCTGG CCCGTACAGT CATCGGCGCT
GCGTCTGTGG GCGCGGCGCG CTGGCTCCTC GATAGGGGGC TGGAGTGGAT TAGGCAGAGG
GTGGTGTTTG GGAGGCCCAT AGCCTCGTAC CAGGCGGTCA GCTTCAGGTT TGCCGAGCTG
TATGCGAGGC TTCAGGCGGC TCAGCTGGCG GTGTACAAGG CGGCGTGGGT TGCGGATAGG
TTCTACAGGG GGGACTCGGC TTTTACTGTG CAAGACGTGG CGACTGCGGG GGCTGTGGCT
AAGCTCTTGG CGGTTCCGCT GGCGGTGGAG GTGGCGTTGG AGGTCATGAA GTGGTTTGGC
GGCGCCTCGT ACTTCAAGGA GACGAACGTG GCGAGGGCCC TCCTGGGCGT ACTGTCCTAC
TACGTGGGGG CTGAGGGGGC TGAGAACATA ATGAAGTTGA TCATTGCCAG AAACGTCGTT
GGGAGAGAGT TTGTGTGA
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| Protein sequence | MDFELSREDR LFLESVKSFA ERVIAPRWVD LDEGKWPIEE AAARLGEAGL LGIPLSSKYG
GQDGTFLQAA LAVEELAYAD PSLAVPVYVL LETAWPYMVQ RYGREEAKEE VLPEVARGRA
FVGIGSTEPQ GGSDVASVVT KAVKEGDLWK LYGEKNMVTG VATILNLPYG GGVVAITRTG
RVEDKHRGIT TFLALLKRRG RVTPGFTHRD WDEIGRHGLP TGYLTLEGLP VEEVFMLGEL
NGGFKVAMEG FNLARTVIGA ASVGAARWLL DRGLEWIRQR VVFGRPIASY QAVSFRFAEL
YARLQAAQLA VYKAAWVADR FYRGDSAFTV QDVATAGAVA KLLAVPLAVE VALEVMKWFG
GASYFKETNV ARALLGVLSY YVGAEGAENI MKLIIARNVV GREFV
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