| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0178 |
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| Symbol | |
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| ID | 4910006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 171030 |
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| End bp | 171929 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640123929 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001055081 |
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| Protein GI | 126458803 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCG TAGTGGCGTC AATAGTGGCG TTGGTGGTTG GCTTGTTGTT GGGATACCTC
TTGGGCGTAT ATACCGCGCC TCAAGCAACT ACTCCTCAAG CTCCGGCGCA GACGGCCACC
ACTGCGCCGG CGACTGCCAC AGCCACTGCT CCTTCAACGA CGCCTCAGGC CGCGTCTCAG
TGCCCCGTCT CTGTGGACGT TATCAAGAAG CGGGGGAAGC TTATCCTTGG CACAGACGCC
ACGTGGCCGC CTTGGGAGTG GGTTAGGGGG AACGAGATAG TGGGGTGGGA CATAGACATA
GCCAGGGAGA TTGCCAAGGC GCTTGGGGTT CAGCTGGAGG TGAGGGACAT GCGCTTCGCC
GGCCTCTTGG AGGCGGTGAG GAACGGCGAC GTGGATTTGG CCTTGAGTGC CATCACGTGG
ACTTCTGAGA GGGAGAAAGT TCTGGAGTTC TCCATGCCGT ACTACCTGGA GTCGGTGGTG
GTTGTGACTT TGGCGAAGCG CACCGACATT AATAGGGTGG AGGACCTCTA CGGCAAGACT
GTGGGTGTTC AAATTGGGAC TACTCACGAG GAGTGGGCGG CGGAGAACTT GGAGAAGCCG
GGCAAGGCGG CTGTGAGGCG GTACGACAAG GTGTACCCCT ACATGGTTGA GGTGTTGAGG
AGGGGGGACG TGGACGCCAT TATCTTGGAC AGGTCTATCG CCACGGCGCT TGTGAGGAAG
TTCCCCGACT TGAAGATCTC CTTCGAGATC CCCGGCACTG CTGGCTACAT CTCCGTGGCT
ATGCCCAAGT GCGCGCAGGA CTTGAAGCTG GTGGTGGACC AGGTCATTGA GAACCTCATG
CAGACGGGGA GGCTTGACGA GATTTTCCAG CGCAACTTCG AGCTGTTTCT CCAGTCGTAA
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| Protein sequence | MKSVVASIVA LVVGLLLGYL LGVYTAPQAT TPQAPAQTAT TAPATATATA PSTTPQAASQ
CPVSVDVIKK RGKLILGTDA TWPPWEWVRG NEIVGWDIDI AREIAKALGV QLEVRDMRFA
GLLEAVRNGD VDLALSAITW TSEREKVLEF SMPYYLESVV VVTLAKRTDI NRVEDLYGKT
VGVQIGTTHE EWAAENLEKP GKAAVRRYDK VYPYMVEVLR RGDVDAIILD RSIATALVRK
FPDLKISFEI PGTAGYISVA MPKCAQDLKL VVDQVIENLM QTGRLDEIFQ RNFELFLQS
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