Gene Pcal_0130 details

Gene Information

• Locus tag: Pcal_0130
• Symbol: hisH
• ID: 4908911
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 126981
• End bp: 127571
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640123881
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_001055034
• Protein GI: 126458756
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTATGGG TCGTAGCCGT GCGCATCGGC GTGGTGGACT ACACGGTGGG AAACCTCGGC 
AGTCTCTTGG CCGCGTTGAA GAGGGCAGGC GCAGAGCCCG TGGTGGTAAA CGAGCCTGAG 
GAGGCCAATA GAGTAGACGC TATCGTGTTG CCCGGCGTAG GCGCCTACGA CGCCGCGGCG 
GCAAAGGCCA GAAGCTTTAA ACGCGTAATA GAGTCTAAGC CGACGCTCGC GATATGTCTC 
GGCATGCAGT TGCTCTTCGA GGGTAGCGAA GAGGGCGCGG AGAGGGGCCT CGGGATATTC 
CCAGGGAGAG CCGAGAGAAT AAAAGCGGCC AAGGTTCCGC ACATAGGCTG GAGCTACACC 
CGCGTGGTTA AGCAGTTGCC CTTCTTGGAG GAGAACTACT ACTACTACCT CCACAGCTTC 
GGTGTCCCGT ATGCCCCAGA CGCGCGCTTT GTGGCATATG TGGAGCTCCA GCGCCCCTAC 
GTCGCCGCGG TGTACAAAGA GCCGATACTC GGCGTGCAGT TCCACCCAGA GAGGAGCGGG 
AAGGCGGGGC TGGCGCTGTT GCGCAACCTC TTTGCCGCCT GGAGGAGGTA G 

 

Protein sequence

MLWVVAVRIG VVDYTVGNLG SLLAALKRAG AEPVVVNEPE EANRVDAIVL PGVGAYDAAA 
AKARSFKRVI ESKPTLAICL GMQLLFEGSE EGAERGLGIF PGRAERIKAA KVPHIGWSYT 
RVVKQLPFLE ENYYYYLHSF GVPYAPDARF VAYVELQRPY VAAVYKEPIL GVQFHPERSG 
KAGLALLRNL FAAWRR