Gene Pcal_0119 details

Gene Information

• Locus tag: Pcal_0119
• ID: 4909633
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 118323
• End bp: 118871
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640123870
• Product: hypothetical protein
• Protein accession: YP_001055023
• Protein GI: 126458745
• COG category: [S] Function unknown
• COG ID: [COG1628] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGCCATTG CAGAGAGCTT TAAGGTTGAA GACGGTTTCT CAGTTCTGGC GGGGGTCGTG 
GCGAGGAGAG ACGGCACGGT GGAGGCAGTG GCCGTGGACA CGGCCACCGT GGGAGGCACA 
GACGCCACAG AGGCCGCTGT GCGAATAGCG GAGAGGCTCC TCAAGCCCGA CGTGAGCATA 
ATCATGCTGG ACGGCTGTGT GGTGTCTTTC TACAACTGGA TAGACGGCGA GGCGCTGTGG 
CGCCGCTTCG GCGTGCCAGT GGCATGCTAC GTGTTTGAAG ACCCCGAGGG CCGCGTCGAG 
GAGGCGGTGA AGAAGCTCTT CAAAGACTGG GAACTGAGGA TTGAGGCCAT TAGGAGGCTG 
GGCTGGCCGA CGCCCTACTA CACAAAGAGT GGGTACAAGA TATACATCAG GTCCTGGGGC 
ATTGACCCAG CAGACGCCGG GCGGGCCGCC GAGCTCTGCG CAAAATTCGG CAAATGGCCA 
GAGCCTATCC GCGTGGCGCA GCTGGTGGCA AGCGGAGTGA GAGAGTACCT AAGCCGCAGA 
AGCCGGTAA 

 

Protein sequence

MAIAESFKVE DGFSVLAGVV ARRDGTVEAV AVDTATVGGT DATEAAVRIA ERLLKPDVSI 
IMLDGCVVSF YNWIDGEALW RRFGVPVACY VFEDPEGRVE EAVKKLFKDW ELRIEAIRRL 
GWPTPYYTKS GYKIYIRSWG IDPADAGRAA ELCAKFGKWP EPIRVAQLVA SGVREYLSRR 
SR