Gene Pcal_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0111 
Symbol 
ID4909733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp109259 
End bp110458 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content59% 
IMG OID640123862 
ProductD-fructose 1,6-bisphosphatase 
Protein accessionYP_001055015 
Protein GI126458737 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1980] Archaeal fructose 1,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.150469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAA CTGTATCAAT AATAAAGGCC GACGTAGGCG GCTTCCCAGG CCACGCGCAT 
GTGCATCCAA AGATGCTCGA ATACGCCGCG GCTAAGCTCA GGGAGGCCCA GAGGCGGGGG
GTCATAATTG ACTACTTCGT GTACAATGTA GGCGACGACA TTTCGCTACT AATGACTCAC
ACCAAGGGCG AAGATAACCC AGAGATACAC GGCCTGGCGT GGGAGACGTT TAAAGAGGTG
ACAGAGCAGG TGGCCAAGAA GTACAAACTC TACGGCGCTG GGCAAGACTT GTTGAAAGAC
GCCTTCTCTG GCAACATAAG AGGCTTGGGG CCCCAGGTGG CCGAGATGGA GTTCGACGAG
AGGCCCAGCG AGCCCTTGAT AGCGTTTGCC GCAGACAAGA CTGAGCCAGG CGCCTTTAAC
CTCCCACTGT ACAAGATGTT CGCAGACCCG TTCAACACGG CGGGGCTGGT GATAGACCCG
TCTATGCACG AGGGCTTCCT ATTCGAGGTG TTAGACGTAG TGGAGCACAA AGTCTACTTG
CTCAAGACCC CTGAGGATGC GTACTCCCTA CTAGGGCTGA TAGGGACCAC GGGCAGGTAC
ATCGTGAGGA AGGTATTTAG GCGGGCGGAC GGCGCGCCGG CAGCCGCCAA CAGCGTAGAG
AGACTGTCGT TAATAGCCGG GAGGTACGTG GGCAAAGACG ACCCAGTGAT GATGGTCAGG
GCCCAGTCGG GCCTCCCCGC CGTGGGCGAG ATACTGGAGG CGTTTGCCCA CCCACACCTA
GTCCACGGCT GGATGCGCGG CAGCCACGCA GGGCCCCTAA TGCCGGCCAA GTTCTACCAC
ATAGACCCCG AGAAGAGGAT AGCCATAGGC CCCAAGATGA CCAGGTTCGA CGGGCCTCCC
AAGGTGGGCG CCCTGGGCTT CCAGCTACAC GAGGGCTATC TAGAGGGCGC AGTGGACATG
TTCGACGACC CAGCCTTCGA CTACGTGAGA CAGGTAGCCG CGCAAATCGC CGACTACATA
AGGCGCATGG GCCCGTTCCA GCCCCACCGC CTGCCGCCTG AGGAGATGGA GTACACAGCC
CTCCCCAAGA TATTGGCCAA GATAAAGTCT TACCCAGCCG ACCAGTACGA GAAGCAGCGG
AGGAAGTACG TGGAAGAGGC CATCAAGGGG ACCCCCGTCG AGCACTCTCA ACACGACTAA
 
Protein sequence
MKVTVSIIKA DVGGFPGHAH VHPKMLEYAA AKLREAQRRG VIIDYFVYNV GDDISLLMTH 
TKGEDNPEIH GLAWETFKEV TEQVAKKYKL YGAGQDLLKD AFSGNIRGLG PQVAEMEFDE
RPSEPLIAFA ADKTEPGAFN LPLYKMFADP FNTAGLVIDP SMHEGFLFEV LDVVEHKVYL
LKTPEDAYSL LGLIGTTGRY IVRKVFRRAD GAPAAANSVE RLSLIAGRYV GKDDPVMMVR
AQSGLPAVGE ILEAFAHPHL VHGWMRGSHA GPLMPAKFYH IDPEKRIAIG PKMTRFDGPP
KVGALGFQLH EGYLEGAVDM FDDPAFDYVR QVAAQIADYI RRMGPFQPHR LPPEEMEYTA
LPKILAKIKS YPADQYEKQR RKYVEEAIKG TPVEHSQHD