Gene Patl_R0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_R0016 
Symbol 
ID4171993 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1202293 
End bp1203823 
Gene Length1531 bp 
Protein Length 
Translation table 
GC content52% 
IMG OID640716004 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000811527 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AATTGAAGAG TTTGATCATG GCTCAGATTG AACGCTGGCG GCAGGCCTAA CACATGCAAG 
TCGAACGGTA ACATTTCTAG CTTGCTAGAA GATGACGAGT GGCGGACGGG TGAGTAATAC
TTAGGAATAT GCCTTTGTGT GGGGGATAAC TATTGGAAAC GATAGCTAAT ACCGCATAAC
GTCTTCGGAC CAAAGGGGGC TTCGGCTCCC GCGCAAAGAG TAGCCTAAGC GAGATTAGCT
TGTTGGTGAG GTAAAGGCTC ACCAAGGCGA CGATCTCTAG CTGTTCTGAG AGGAAGATCA
GCCACACTGG AACTGAGACA CGGTCCAGAC TCCTACGGGA GGCAGCAGTG GGGAATATTG
CACAATGGGG GAAACCCTGA TGCAGCCATG CCGCGTGTGT GAAGAAGGCC TTCGGGTTGT
AAAGCACTTT CAGTTGTGAG GAAAGGTTGG CGGTTAATAC CCGTTAGCTG TGACGTTAGC
AACAGAAGAA GGACCGGCTA ACTCCGTGCC AGCAGCCGCG GTAATACGGA GGGTCCGAGC
GTTAATCGGA ATTACTGGGC GTAAAGCGCA CGCAGGCGGT TTGTTAAGCT AGATGTGAAA
GCCCTGGGCT CAACCTGGGA ATTGCATTTA GAACTGGCAG GCTAGAGTTT TGGAGAGGGG
AGTGGAATTC CAGGTGTAGC GGTGAAATGC GTAGATATCT GGAGGAACAT CAGTGGCGAA
GGCGACTCCC TGGTCAGTAA CTGACGCTCA TGTGCGAAAG TGTGGGTAGC GAACAGGATT
AGATACCCTG GTAGTCCACA CCGTAAACGC TGTCTACTAG CTGTTTGTGG ATTTAATCCG
TGAGTAGCGA AGCTAACGCG ATAAGTAGAC CGCCTGGGGA GTACGGCCGC AAGGTTAAAA
CTCAAATGAA TTGACGGGGG CCCGCACAAG CGGTGGAGCA TGTGGTTTAA TTCGATGCAA
CGCGAAGAAC CTTACCTACT CTTGACATAC TAGAAACTTT TCAGAGATGA ATTGGTGCCT
TCGGGAATCT AGATACAGGT GCTGCATGGC TGTCGTCAGC TCGTGTCGTG AGATGTTGGG
TTAAGTCCCG CAACGAGCGC AACCCCTGTC CTTAGTTGCC AGCCTTAAGT TGGGCACTCT
AAGGAGACTG CCGGTGACAA ACCGGAGGAA GGTGGGGACG ACGTCAAGTC ATCATGGCCC
TTACGAGTAG GGCTACACAC GTGCTACAAT GGCGAGTACA GAGGGAAGCA AACTTGCGAG
AGTAAGCGGA TCCCTTAAAG CTCGTCGTAG TCCGGATTGG AGTCTGCAAC TCGACTCCAT
GAAGTCGGAA TCGCTAGTAA TCGCAAATCA GAATGTTGCG GTGAATACGT TCCCGGGCCT
TGTACACACC GCCCGTCACA CCATGGGAGT GGGTTGCAAA AGAAGTAGCT AGTTTAACCT
TCGGGAGGAC GGTTACCACT TTGTGATTCA TGACTGGGGT GAAGTCGTAA CAAGGTAACC
CTAGGGGAAC CTGGGGTTGG ATCACCTCCT T
 
Protein sequence