| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4270 |
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| Symbol | |
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| ID | 4176060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5139250 |
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| End bp | 5141700 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057307 |
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| Product | putative Zn-dependent aminopeptidase |
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| Protein accession | YP_663823 |
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| Protein GI | 109900568 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATA AAATAGTCAC TACAGCGTTA ATTTCGCTGT TATCGATCAG TGCTGCGAAT
GCCGCTATCG AACAAACCAA AGGCGACTTT AAAGATAAGT TCCGCCAGTT AGATGAGTCA
CTTCCTACGC CAAATGTATA CCGAAACGCC GCTGGGCAAC CGGGGCATCA ATATTGGCAG
CAAGCTGTAG ACTACAAAAT TAAAGTGCAT TTAAACGAGG AAAAGCGTCG TTTAGAAGCC
AGTGAAAGCA TTACTTATAA AAATAACTCG CCTGACACGT TAAGATATTT GTGGCTGCAG
TTAGATCAAA ATAAATTTAG AAATGACTCC ATGTCAGCTA TGACGACCAC CTTTGGTGGT
ATAGGCGCTC GTGGTCCTGC TACTCAAGGC GCGACCAACA GTAAGCCTGC ACAATTGAGC
TTAGCCGCAT TGCGACGAGA CCAATTCGTG GCCGATCATG AACTTGGCTA CGACATCCAA
AAAGTCGTTG ATTCTACTGG TTCTAAGCTG CACCACGTTA TCGTCGGCAC GAATATGCGT
ATCGATTTGG CACAGCCTTT AGCGCCTGGA AAGTCTGTCG ATTTTGCGAT TGATTTTGCT
TACAACATAG TGGAAGAAGA TGCCGTATCG GCTCGTTCTG GTTATGAGCA CTTCCCTGAT
GACGAACGTG ATGGCGGCAA TGATATCTTC TTACTTGCCC AGTGGTTCCC ACGCCTACAC
GCTTATACCG ACTATGAAGC ATGGACCAAC AAAGAGTTTA TTGGCCGCGG TGAATTCACT
CTCGAGTTTG GTGATTATGA TGTTGAAATG ACCGTTCCAG CGGATCACAT CGTAAGCTCT
ACAGGTGTGC TACAAAATCC TAAGCAAGTA CTTACTTCAA CTCAGCGTAA ACGTTTGAAA
GAAGCTGAAA CCGCAAAACG TCCTGTGTTT GTCGTAACCG CTGATGAAGC ATTGGAAAAT
GAAAAGGCCG GTACCAGTAA AGAAAAAACC TGGAAATTCA GTGCTCAAAA CGTACGCGAC
TTCGCATGGG CATCATCACG TAAGTTCATG TGGGATGCCA AAGGTCATCC ACAAAAAGGT
TCAGAGCAGT CATTAGTCAT GGCGATGTCT TTTTATCCTA AAGAAGGCGG CGATTTATGG
AAGAAATATT CGACTGAATC AGTAGTGCAT ACATTAGATG TGTACTCTCG CTTTTCATTT
GATTATCCCT ACCCGACGGC GCAATCGGTC AATGGTCCTG TCGGTGGCAT GGAATACCCC
ATGATTTCGT TTAACGGCCC GCGTACTGAA TTACAGGACG ACGGCAGCCG TACCTATTCT
CAGGCTGAAA AGCGCTTCTT GATTGGCGTC GTTATTCACG AAGTAGGACA TAACTACTTC
CCAATGATTG TTAACTCAGA TGAGCGTCAA TGGTCATGGA TGGATGAAGG GTTAAACAGC
TTTTTAGATG GCGTTGCTGG TCGCGAATGG GATCCAACAA TTCCTTGGGG TGTGGAGCCG
CGTGATGTAG TAGGTTACAT GAAATCTTCA TCTCAGGTGC CTGTGATGAC CCAATCTGAT
AGCGTATTGC ACCTTGGCCC TAACGCGTAT ACCAAACCAG CTGTGGCCCT TAATATATTG
CGTGAAACTA TTCTTGGTCG TGAGCTATTT GATTTTGCTT TTAAAGAATA CGCCCAACGC
TGGATGTTTA AGCGCCCAAC ACCGTCAGAC TTTTTCCGCA CCATGGAAGA AGCCAGTGGT
GTTGATTTAG ATTGGTTCTG GCGTGGATGG TTTTACACCA CAGATCACGT TGATATCTCC
TTGGATAAGA TCTCTAAACT GCGTTTAGAT ACCAAAAATC CAGACATCGA TTTTGATCGT
CAGCGCCAAG AAGAGTTAGA TAAGCCTCTG TCTTTGACCG ACGAGCGTAA TAAAGCCGAA
GGTAAAGAGC TTTGGGTTGA CAGATTCTCT GACATTACCG ACTTCTACGA CGAGAATGAT
CGCTTCACAG TGACCAACAA AGAACGTAAT AAATACAACA AATTCCTAAA AGACCTTGAG
CCTTGGGAAC GCACAGCATT TGATCGTGCC GTCAAAGAAG ACAAAAACTA TTACGTGCTT
GATTTCTCAA ACAAAGGTGG CTTAGTCATG CCAATCATTC TTGAGCTTAC CTTTGCCGAT
GGCAGCAAGG AGAATCAATA CATCCCAGCT GAAATCTGGC GTCGAACCCC TAAAGCGGTG
AGCAAATTGA TCGTGACTGA CAAGGACAAA GAATTGGTTA GCGTTTCAGT CGATCCGCGT
TGGGAAACCG CCGACGTTGA TGTAAGCAAT AATGATTACC CTCGTAAGAT TATTCCTTCA
CGTATCGAAG CTTACAAAGC GAAGAAGAGC ACTAAGAAAG TGTCTCGCGA TATCATGCAA
GACATCAAAA CTGAGCTCAA AGGCGATGAC GAAGACGAGA ATGACGACTA G
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| Protein sequence | MFNKIVTTAL ISLLSISAAN AAIEQTKGDF KDKFRQLDES LPTPNVYRNA AGQPGHQYWQ
QAVDYKIKVH LNEEKRRLEA SESITYKNNS PDTLRYLWLQ LDQNKFRNDS MSAMTTTFGG
IGARGPATQG ATNSKPAQLS LAALRRDQFV ADHELGYDIQ KVVDSTGSKL HHVIVGTNMR
IDLAQPLAPG KSVDFAIDFA YNIVEEDAVS ARSGYEHFPD DERDGGNDIF LLAQWFPRLH
AYTDYEAWTN KEFIGRGEFT LEFGDYDVEM TVPADHIVSS TGVLQNPKQV LTSTQRKRLK
EAETAKRPVF VVTADEALEN EKAGTSKEKT WKFSAQNVRD FAWASSRKFM WDAKGHPQKG
SEQSLVMAMS FYPKEGGDLW KKYSTESVVH TLDVYSRFSF DYPYPTAQSV NGPVGGMEYP
MISFNGPRTE LQDDGSRTYS QAEKRFLIGV VIHEVGHNYF PMIVNSDERQ WSWMDEGLNS
FLDGVAGREW DPTIPWGVEP RDVVGYMKSS SQVPVMTQSD SVLHLGPNAY TKPAVALNIL
RETILGRELF DFAFKEYAQR WMFKRPTPSD FFRTMEEASG VDLDWFWRGW FYTTDHVDIS
LDKISKLRLD TKNPDIDFDR QRQEELDKPL SLTDERNKAE GKELWVDRFS DITDFYDEND
RFTVTNKERN KYNKFLKDLE PWERTAFDRA VKEDKNYYVL DFSNKGGLVM PIILELTFAD
GSKENQYIPA EIWRRTPKAV SKLIVTDKDK ELVSVSVDPR WETADVDVSN NDYPRKIIPS
RIEAYKAKKS TKKVSRDIMQ DIKTELKGDD EDENDD
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