| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4266 |
|---|
| Symbol | |
|---|
| ID | 4176056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 5134771 |
|---|
| End bp | 5135976 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638057303 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_663819 |
|---|
| Protein GI | 109900564 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.701794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCTGG TCTTGGTCGA TAAGGTCAGA ACACATGTTT GGAAGCCACT TTTACACGAA
GTGGCGGCTG GCATTATCGA TAAAAACTCC GATGGAGTGG ATTATCGCAT TCATGCTAGT
CGTCTTAAAT ATGAATTTCA GCAAGGCACA TTGAAAGGTA TCGATGAGCA AAATAAATCG
ATAGCGCTGG ACGCACTTTA TGATGAAGAA GGCCAGCTGA TCCTGCCTGA GCGCAGTATT
GAGTACGACA TACTCGTATT AGCGGTTGGA AGTGTGAGTA ATGACTTTGG TACGCCAGGC
GTGAAAGAGC ACAGCTATTT CTTGGATTCT TTAGAGCAAG CTGAGCGTTT TCATCGTGCG
TTGCTCAACC AAATGCTGAA GGTCAACCAG CCCAATACTC AACAATCGAT GCTACGAGTA
TCGATTGTCG GAGCTGGCGC AACGGGTACT GAGTTAGCAG CACAATTACA TCATGTTGCA
AATTTATCCC GGGCTTATGG TATGCCTGCC ATGTCGGCCC AGCGCCTAGA GATCTCGATC
ATTGAAGCGG GCCCCAGAAT ATTGCCAGCA CTGCCGGAGC GCATCGCCTA TGCAGCCAAA
AACGCGTTAC AAAAAATTGG CGTAAAGCTG TATGAAGATA CAAAAGTGAC AAGGGCTGAG
AAAAATGGAT TTGTCACTGC TGATGACGAA CTCATCGAAG CAGATTTAAT GGTATGGGCA
GCAGGTGTTA AAGCGCCTAA TCTGATTAAA GAGCTCGATA TGTTTGAAAC CAATCGCGCG
CAACAAATTT TGGTCGATCC GCAGTTAAGG GCTAAGAACC ACCAAGACAT ATACGTGCTA
GGTGACTGCT GTGCGTTTCA GCAAGAAGAC GGTACTTGGG TACCCCCTCG AGCGCAATCT
GCTCATCAAA TGGCATCGAC AGTGTACAAA AATATAGTTA ATCAACTCCA AGGTAAGGAG
TTTGAAAACT ATCAATATAG TGATTATGGT TCGCTTGTTC ACTTGAGTAA GTACAGCACA
GTAGGCAGCT TAATGGGTAA CCTGTCTAAC AGCAGCATGT TTGTGGAAGG TAAGCTAGCG
CGCTTGGTGT ACACCTCACT CTACAGTATG CACCAGTTCG CAGTGCATGG ATGGTTAAAA
GCAACCCTAA CCATGCTGAG TCGCAGAGTG AGCAAATTTG TTGGGCCAAA ACTGAAATTA
CATTAA
|
|---|
| Protein sequence | MELVLVDKVR THVWKPLLHE VAAGIIDKNS DGVDYRIHAS RLKYEFQQGT LKGIDEQNKS
IALDALYDEE GQLILPERSI EYDILVLAVG SVSNDFGTPG VKEHSYFLDS LEQAERFHRA
LLNQMLKVNQ PNTQQSMLRV SIVGAGATGT ELAAQLHHVA NLSRAYGMPA MSAQRLEISI
IEAGPRILPA LPERIAYAAK NALQKIGVKL YEDTKVTRAE KNGFVTADDE LIEADLMVWA
AGVKAPNLIK ELDMFETNRA QQILVDPQLR AKNHQDIYVL GDCCAFQQED GTWVPPRAQS
AHQMASTVYK NIVNQLQGKE FENYQYSDYG SLVHLSKYST VGSLMGNLSN SSMFVEGKLA
RLVYTSLYSM HQFAVHGWLK ATLTMLSRRV SKFVGPKLKL H
|
|---|
| |