Gene Patl_4216 details

Gene Information

• Locus tag: Patl_4216
• ID: 4176005
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 5076728
• End bp: 5077312
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638057252
• Product: hypothetical protein
• Protein accession: YP_663769
• Protein GI: 109900514

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAATG TCATTATTGC CATTGGATTA CTGCTAAGCA GCATCACCAC AGTTCACGCG 
CAAGATATTG CGAGCCAGTT ACAGGCTTGT CGCGCTCAAA CAGACAATGC TGTTCGCCTT 
GCCTGCTACG ACAAACTTGC TGTTAAATAT GCGGAAAAAA ACATCAAGAA TGACCTACAT 
GTCACTAAGG TGAGCACACC AAACAGTAAC GCCGCAACAC CACCTGTCAT AACGCCGACT 
AAGTCACCAG CTACATCTCC TGTAAGCGTT AGCGCAGAGA AACGCGCGCC AACAGATAAC 
TATGCCAGCC GCGAAGATCA AGTCAAGCGC TTTGGTTTGT CGAAGGTGAC GGAGCCACAA 
GAAAAAGTTG AAAAAATAAC CTCAGTCATT ACATCAGTAC AAAAAAATCC TTACGGCAAA 
CTGATCATCA CTTTGGAAAC AGGCCAAGTT TGGCGCCAGA CCAACAGTAC ATCACTGAGA 
CTAAAACCGG GACAAGAGGT TTATGTTGAA GAAGGGGCGC TGGGTTCTTA CTTCTTAGGC 
AAAGAGTCAA GCAACAAGCG TATTCGAGTG AAGCGGTCAA AGTAA 

 

Protein sequence

MKNVIIAIGL LLSSITTVHA QDIASQLQAC RAQTDNAVRL ACYDKLAVKY AEKNIKNDLH 
VTKVSTPNSN AATPPVITPT KSPATSPVSV SAEKRAPTDN YASREDQVKR FGLSKVTEPQ 
EKVEKITSVI TSVQKNPYGK LIITLETGQV WRQTNSTSLR LKPGQEVYVE EGALGSYFLG 
KESSNKRIRV KRSK