| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4187 |
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| Symbol | |
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| ID | 4175976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5043102 |
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| End bp | 5044349 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057223 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_663740 |
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| Protein GI | 109900485 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATT TTCGTCAACA AGCATTGGAC TACCATGCTA AGCCAGTACC AGGAAAGATA
GCGATTGCGC TAACAAAGCC CGCGGAAACT GTGACCGACT TAGCCTTAGC TTATAGCCCT
GGCGTCGCTG AACCTGTTCG CGAGATTGCT GCAGACCCAA ATGCGGCATA CAAATACACT
GCTAAAGGCA ACATGGTCGC CGTCATTTCA AACGGTACCG CTATTCTTGG CCTTGGCAAT
TTAGGCCCAC TGGCTTCGAA ACCGGTTATG GAAGGTAAAG CGCTATTGTT TAAACGCTTT
GCTGGGCTAG ATTCCATCGA TATAGAAGTA AAGCACAACA CCACTGAAGA CTTTATTAAC
ACTGTGGCGA ATATTGCCGA CACATTCGGT GGCATCAACT TAGAAGATAT AAAAGCACCC
GAGTGTTTTG AAATAGAGCA AGAATTGATT AAGCGCTGCA ATGTACCGGT ATTTCACGAT
GATCAACACG GTACCGCTAT TGTGACCGCA GCAGGAATGC TCAATGCGCT GGAGGTACAA
GGTAAGGAAC TTTGTGACGT TACCATCGTT TGTATGGGAG CGGGTGCAGC GGCTATTGCC
TGCATGGAAT TATTGATTAA ATGTGGTGCC AAGCGAGAAC GTATTTATAT GCTTGATACC
AAAGGCGTTA TTCATACCAG ACGCGATAAC CTTACTCACC ATAAAAAGTT ATTCGCTAAT
AATACTGACA AGCGTACCTT GGAAGATGCG CTAGACGGCG CAGACGTATT TGTGGGTGTT
TCAGGGCCGG ATGTGTTGCC GCCCGAAGCA TTGGCATTGA TGGCACCTAA CCCAGTTATT
TTTGCTTGCT CAAATCCTGA TCCAGAAATA AAACCAGAGT TGGCTCATGC TGTGCGTGAT
GATGTGATCA TGGCTACAGG GCGCTCAGAT TATCCGAATC AGGTGAATAA CGTGCTGTGC
TTTCCGTTTA TTTTTCGTGG TGCCTTGGAT GTACGTGCAT CGGTCATTAA CGATGAAATG
AAAATAGCGG CTGTTGAAGC GATCCGAAGT ATTGCGCGCG AGCCGGTGCC ACAAGAAGTA
TTGGCCGCCA GTAATTTAAC GAGTTTAACC TTTGGTCGTG AGTATATTAT TCCTAAGCCA
ATGGATCCGC GTTTGTTGCA ACGAGTGGCT ACCGCAGTCG CGCAGGCCGC GATTGACTCA
GGTGTCACCA CATTGAAAGC GCTGCCACCG GGTTATATGC AAGATTAG
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| Protein sequence | MSDFRQQALD YHAKPVPGKI AIALTKPAET VTDLALAYSP GVAEPVREIA ADPNAAYKYT
AKGNMVAVIS NGTAILGLGN LGPLASKPVM EGKALLFKRF AGLDSIDIEV KHNTTEDFIN
TVANIADTFG GINLEDIKAP ECFEIEQELI KRCNVPVFHD DQHGTAIVTA AGMLNALEVQ
GKELCDVTIV CMGAGAAAIA CMELLIKCGA KRERIYMLDT KGVIHTRRDN LTHHKKLFAN
NTDKRTLEDA LDGADVFVGV SGPDVLPPEA LALMAPNPVI FACSNPDPEI KPELAHAVRD
DVIMATGRSD YPNQVNNVLC FPFIFRGALD VRASVINDEM KIAAVEAIRS IAREPVPQEV
LAASNLTSLT FGREYIIPKP MDPRLLQRVA TAVAQAAIDS GVTTLKALPP GYMQD
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