| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4129 |
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| Symbol | |
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| ID | 4175918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4966606 |
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| End bp | 4967313 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638057165 |
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| Product | anti-ECFsigma factor, ChrR |
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| Protein accession | YP_663682 |
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| Protein GI | 109900427 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTA ATGCCGATTT TAGCCAGCGT GTCGTTGTTC ACAGCCAAAA GCAACCTTGG
GTAGCATCAC CGATGCCAGG GGTTGACCGT AGGCCGCTTG ATCGCGTTGG TGATGAAGTC
GCTCGGGCAA CCACTATAGT GCGCTATGCA CCAGGCAGTG AATTTTCGCC TCATGTGCAT
ACCGGCGGCG AAGAATTCAT CGTGCTTGAG GGCGTGTTTC AAGATCAGCA TGGTGACTTT
CCTGCAGGCT CCTATATTCG CAACCCGCCT CAATCGTCAC ATAAACCTGG CTCTGATGAA
GGCTGCGTAA TTTTTGTAAA GCTATGGCAA TTCAACCCAG ATGACAGATT ACACGTGAAC
GTACCTGCCA GAGCAGATGA CGCTGCATCA TCATTTGAAT TTAACCCGCC CGCGACAGGT
GTAATAAGTA AAATACTCTA TCGTGATGAG TATGAAGTCG TCAGCGTATA TGAATTAGCG
CCCAACGGTG TGCTTGAGCT TGAAGCCAGC AAAGGCCTTG AGGCCCTAGT GCTTACAGGC
GAAATTAGCG AAGGCGGCGA CACCCTAGAA AAGCACAGCT GGCTGCGCCT GCCCACAGAC
AGTCAATTCA AAGCTAAAGC TGGTCAATCC GGCGCAAGGC TATGGATAAA AACCCAGCAT
CTGCCGTTTG TAGAAGAGCA AATAGCGCGT GTTCAAAACG CTAAATAG
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| Protein sequence | MNINADFSQR VVVHSQKQPW VASPMPGVDR RPLDRVGDEV ARATTIVRYA PGSEFSPHVH
TGGEEFIVLE GVFQDQHGDF PAGSYIRNPP QSSHKPGSDE GCVIFVKLWQ FNPDDRLHVN
VPARADDAAS SFEFNPPATG VISKILYRDE YEVVSVYELA PNGVLELEAS KGLEALVLTG
EISEGGDTLE KHSWLRLPTD SQFKAKAGQS GARLWIKTQH LPFVEEQIAR VQNAK
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