| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4102 |
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| Symbol | |
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| ID | 4175891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4931760 |
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| End bp | 4934045 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638057138 |
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| Product | superfamily I DNA/RNA helicase-like protein |
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| Protein accession | YP_663655 |
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| Protein GI | 109900400 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGCTT CAGATTTGAA TGAAAATCGA GGAAAGATAA ATTCAATTCT CCATTCTAGA
ACCAACATTT TTCACAAGAA TTCTGATAAT CAATGGGGGG TGATAGAAAA GGAACAATCT
GATACGACAA GTAAATTTTT GGATGACTAT CCTGCAAAAA AAAACGTAAG TGTAACGATA
GTTGTTGAAA ATATAGACTT GGTTGAAAGG ATTAAAGATG AGTTAAAAAA AACACCTAAT
CAAAAACCCA GATCGTTATC AGGATCATTA AATGAACCCC GTCAATTGGT GACTAGGACC
CTTCACAGTT ATCAGGATGT TTTTACAAAA GGTGAAGATA ACAGATGGTC TATAAAGGCC
GACTATGTCG ATAACACAAG GGATCCGGAC GCCGATCTAG AGGATGTAAG ACCTGATGAA
GTATCTGTTG GTCGCTTACC TGTAGCCGAT TTCAAAGAGC AAGATAAACC CCCGCAGCAG
GCCGTTATCG AGGCAAGGCT TGATAGAAGT TTTCTTGTCC TAGCGCCTCC GGGAACAGGA
AAAACCCACA CATTAATTGA AAGGCTGGTT TACGCCATCA CCAAATCCTA CCGAGAGGTG
GATGCTGGGG AACTACTGGT GTTGAGCTTT ACCCGTGCAG CAGTTGGAGA AGTTCGGGAG
CGTATATCTA AAGCAATTAA GGATGGCGCG CCAAGCAGTC TGCGGTATGT GCAGGTAAAA
ACCTTTGATG CTTACGCTAC TTGGTTGTTA AATGATGGTG GCTATGACAT TGCTGGACAA
ACCTATGATG CAAGGATTCA GCTGCTTACT GAAAAACTTG AGACAGTAGA GTTAAGCCAA
GTAACGGACC GTATTGGCCG TTCCCGTTAT TTATTTGTTG ATGAAATACA AGATCTGGTT
GGCGTACGTG CCGATATGGT TTTTGAGTTG GTTAAGCGAA TTCTCGCTCG TAAAGGCTCC
GTTACTTTGT TAGGGGATCC TCACCAGTCC CTGAACGATT ACCAAATCAA GGAAAACCAA
ACAGATTCTG CAGAGTTCCT ACAAAAAGTA CAGGACCATC TCAGTGGTGG ATTAGAGCAA
TTTGAGCTAA AAGAATCACA CCGCTACGAA ACATCAGAAA TGAAACAACT GGCCGCTGAC
GCAAAATTGA TCCTTGATAA TTTAGGGATA ACAGCCGAGG ATAAATTTTC TGCTTTAGTG
AAGCTAATTC CTGATATTTC ACAGGAACAG TTGATTGAAA AATTCAATAG CGAGTCAGTT
GATGCCTTAC TCTGCCGTTC TAATGGCGAG GTTTTCCGGT GGCTAAACTG GCACCAGGAG
CAGGGCAATT CTTGCACCGT TAATGCTGGA GCAATTGGGC GGCCATGGCC GGCATGGATC
GGTGAAGCGG TCATGCACTA CCAGCAAGAG GTAATTACCT ATCAAAATTT TATAAGTCGT
GTCCATTCTA ACGTTTCGGC AAGCACAATT CCCTCTGAAA GTGAGCTCGA TAATTTTCTA
AACAACGAAC GTTTAGTGAG GCATAACGTT ATTAACCTTG ACGAGTTGGC CTTTCGCCTA
AAATATCTTT CCCCTGCAAT AAAAGGTGAT TCGTCCGAAA AAGGATTAAT CGTTTCAACA
GTTCATAAAG CCAAAGGCCT CGAATATAAA AATGTAGTGG CTATCCAGCC AAGTCAGAAC
AATATTACGG ACGAAGAAGT GCGCGTGCTT TATGTGGCAA TAACTCGAGC TAAGAAGAGT
ATATCTCTAC TTCCAAAAAA ACAGGTGCCT TTCGGTGGTT ATATGAAAAG GGGGTGGGGT
GGTCATTATC GTTACTCGCA GAATGGCACG AAGTTTAATC AAATATTAGG TGTGGAAGAC
TTTAATTTGG AAGCGCTATT TATCTTGGAA AATGGAAGCG TCGATCAAGA AGCGCTTGTG
AACTACTTAT CTTGCTATAA AGAAAATCAC AGGTTTATTA TTAGGGCCGT GAGTCGTAAT
AAAGAGCTAG ACCATAATTA TTGTCTTTTT ATGCTTACAG GCAATAAATC AGTTAAAATT
TGCGCCGTTA GCGGACCTCT CCAGAAAGAT TTAAATGCAA TGTCACTTAA AAAAGAAAAC
GACCAGTGGG TTGCTGCCTA CGGAGATGGT GGTGCGATGA TGAATTTGGG GGGGGGCCTG
AATTACCAAA CCATCGTCCA CCCAATTCAA TCACCCATCC TCGCTAGACA CATTGGCCCA
GCCGGCGTCA TGGTGTTCCC ATTAATACAA GGTTTTTTCC CACTCTCAAG AGCAACAGGA
GAATAA
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| Protein sequence | MLASDLNENR GKINSILHSR TNIFHKNSDN QWGVIEKEQS DTTSKFLDDY PAKKNVSVTI
VVENIDLVER IKDELKKTPN QKPRSLSGSL NEPRQLVTRT LHSYQDVFTK GEDNRWSIKA
DYVDNTRDPD ADLEDVRPDE VSVGRLPVAD FKEQDKPPQQ AVIEARLDRS FLVLAPPGTG
KTHTLIERLV YAITKSYREV DAGELLVLSF TRAAVGEVRE RISKAIKDGA PSSLRYVQVK
TFDAYATWLL NDGGYDIAGQ TYDARIQLLT EKLETVELSQ VTDRIGRSRY LFVDEIQDLV
GVRADMVFEL VKRILARKGS VTLLGDPHQS LNDYQIKENQ TDSAEFLQKV QDHLSGGLEQ
FELKESHRYE TSEMKQLAAD AKLILDNLGI TAEDKFSALV KLIPDISQEQ LIEKFNSESV
DALLCRSNGE VFRWLNWHQE QGNSCTVNAG AIGRPWPAWI GEAVMHYQQE VITYQNFISR
VHSNVSASTI PSESELDNFL NNERLVRHNV INLDELAFRL KYLSPAIKGD SSEKGLIVST
VHKAKGLEYK NVVAIQPSQN NITDEEVRVL YVAITRAKKS ISLLPKKQVP FGGYMKRGWG
GHYRYSQNGT KFNQILGVED FNLEALFILE NGSVDQEALV NYLSCYKENH RFIIRAVSRN
KELDHNYCLF MLTGNKSVKI CAVSGPLQKD LNAMSLKKEN DQWVAAYGDG GAMMNLGGGL
NYQTIVHPIQ SPILARHIGP AGVMVFPLIQ GFFPLSRATG E
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