| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4024 |
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| Symbol | |
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| ID | 4175813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4847494 |
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| End bp | 4848351 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638057060 |
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| Product | aminotransferase, class IV |
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| Protein accession | YP_663577 |
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| Protein GI | 109900322 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCG TATTTTTAAA TGGGGAATAT CTCCCCCAAG AACAAGCTAA AATTTCACCT
ATGGACCGCG GGTTCTTATT CGGCGACGGC ATTTATGAAG TGGTACCTAC CTATCAAGGT
GAAGCTGTTG GCTTTATGCC TCATATTGAA CGTATGCAAT CGGGTTTGGC GTCTATCGGC
ATTCAACTTG ATTACACAGT AGAAGACTGG CAAGAAATCA TTCATACGTT GATCGCAAAG
AACGAGACCG GTAACCGCGG AATTTATCTT CATGTTAGTC GCGGCACTGA CACCAAACGA
GCTCATGCAT ATCCGACAGG CGTCGAACCA ACGGTATTTG CCTTTTCATT CGAGATACCG
CCTGCGCCGA CACCAGACAA AGAAGGTGTA AAAGCGTTCA ATGTTACCAG CAGTGAAGAT
TTGCGCTGGA AGCGATGCAA TATTAAATCG ACCTCGTTAC TCGGCAATGT TATGCATTAT
CAACAAAGCC AAGATCTTGG TATGCAAGAA ACCATACTGT TTAATCAACA ACAGGAACTT
ACCGAAGCAA GCTCATGCAA CGTATTTATG GTCAAAAATA ACGTGATCGC TACTCCCGCT
TTGGATAACC AACTGCTACC AGGTGTTACT AGAAAGTTGC TGTTAGCCAT TTTACGTGAG
CACAGCTCAT TTAAGGTTGA AGAACGTGTT ATCACGATGG ACGAGGTACG TGATGCGGAT
GAATTATGGC TGACCAGCTC ATCCAAAGAA GTGGCTCCTA TTGTAACGCT TGATGGTACT
CCGGTGGGTA ACGGTTCTGT CGGTGATGTA TGGTTGCAAG CACAAGCCTT GTTTAGCCAA
TATAAATATC AATATTAA
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| Protein sequence | MSIVFLNGEY LPQEQAKISP MDRGFLFGDG IYEVVPTYQG EAVGFMPHIE RMQSGLASIG
IQLDYTVEDW QEIIHTLIAK NETGNRGIYL HVSRGTDTKR AHAYPTGVEP TVFAFSFEIP
PAPTPDKEGV KAFNVTSSED LRWKRCNIKS TSLLGNVMHY QQSQDLGMQE TILFNQQQEL
TEASSCNVFM VKNNVIATPA LDNQLLPGVT RKLLLAILRE HSSFKVEERV ITMDEVRDAD
ELWLTSSSKE VAPIVTLDGT PVGNGSVGDV WLQAQALFSQ YKYQY
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