| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4006 |
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| Symbol | |
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| ID | 4175790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4821308 |
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| End bp | 4822492 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057038 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_663560 |
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| Protein GI | 109900305 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.927279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTC TTCATTTATT AAAAACTGCG GTGGGCGCTA GTTGGGCCTT ACGCCAAACT
TCCGAGTTGG TAAAGCTAGG TATTGAGGTA CACCTTGTTT TACCAGAGGG ACCGATGGTT
GGGCGTTATA AAGACGCTGG GGTCGTGGTG CATATATTCG ATCCTTCGAT AGTGCTTAAA
CAGCCATGGA AAAATATCGC AAGGGCTAAA AAACTGCGCC AAATAGTCGA GGAGGTTAAG
CCTAATATCA TTCATAGTCA CTTTGTCGCT ACTACGCTAC TGATGCGTTT AGCGCTTCGA
GGCTACGCTA TTCCGCGTAT TTTTCATGTA CCCGGGCCGT TGCACCTTGA GCATTGGGGC
TTTCGCCAAG CCGAGTTAGC CACTGCCAAT AGTGATGACT ATTGGTTGGC ATCCTGCCTT
TGGACAAAAA ATGCATATAA GTCATACGGC ATTGATTCAC AACGGGTAGG ATTAGCGTAT
TACGGTGTAA ATGCGGATGA TTTTTCATTT ACCTCGCCAG CTAATGACAA CCTCGCATCT
CAATTAGGGT TGGCACAAGA TACCTTTATA GTAGGGATGG TGGCTTATTT TTACGGACCT
AAAGCGTACC TTGGGCAAAA ACGTGGGTTA AAAGGGCATG AAGACTTAAT TGATGCTATC
GCCATTGTTC GAAAGCGTTA TCCGAATGTG AAATGCCTAT TTGTTGGTGG GCCATGGGCT
GGTGCTGACA AATACTTCAC GCAAGTGCAA CAGTATGCAC ACCAGCAAGC TCCTGATGGC
TGCGTATTCA TGGGCTTACG AAACGATGTG CCTAAGCTGT ATCCGCAATT TGATTTAGCG
GTTCATCCCT CGCATTCTGA AAACGTCGGC GGTGCAGTAG AGTCAATGTA CGCTGGGGTA
GCAACGCTGA CTTCAAATGT TGGTGGCTTT CCTGATTTAG TTGAAGATGG CGTTACTGGT
TATATGGCAC CAGCAAAAGC ACCTGAACTG CTTGCGCAGA AAATAATACA GGCCATTGAG
CACCCTGAGG AGCGAAAAAG TCTGATTGCA AATGCCAGTA TTCGTGTCGC TAATATTATG
AATGTGCAGC TTAACGCTAA GCAGATCACT GAGTTTTATC AACAAGTATT GTCTCAAAGA
ACTGAGCCTG TGGTATTGCC TGAGCGGGGC GACCGCAATG CTTAA
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| Protein sequence | MKVLHLLKTA VGASWALRQT SELVKLGIEV HLVLPEGPMV GRYKDAGVVV HIFDPSIVLK
QPWKNIARAK KLRQIVEEVK PNIIHSHFVA TTLLMRLALR GYAIPRIFHV PGPLHLEHWG
FRQAELATAN SDDYWLASCL WTKNAYKSYG IDSQRVGLAY YGVNADDFSF TSPANDNLAS
QLGLAQDTFI VGMVAYFYGP KAYLGQKRGL KGHEDLIDAI AIVRKRYPNV KCLFVGGPWA
GADKYFTQVQ QYAHQQAPDG CVFMGLRNDV PKLYPQFDLA VHPSHSENVG GAVESMYAGV
ATLTSNVGGF PDLVEDGVTG YMAPAKAPEL LAQKIIQAIE HPEERKSLIA NASIRVANIM
NVQLNAKQIT EFYQQVLSQR TEPVVLPERG DRNA
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