Gene Patl_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3984 
Symbol 
ID4175764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4795260 
End bp4795868 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content48% 
IMG OID638057012 
Productglutathione S-transferase-like 
Protein accessionYP_663538 
Protein GI109900283 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.10217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT ACGAAACGCA AACCGCACCT ACGCCCCGTC GAGTGCGTTT TTTTCTGGCC 
GAAAAAAACC TTCCCATGGA GTACGTTCAA GTCGACATAC AAGGCGGTGA AAATTTAAGC 
CCTGCTATGC GCGCCCGTAA TCCCATGGCC AAAGTGCCCG TGCTGGAACT AGACGACGGC 
ACGTGCATCT ATGAATCTGT CTCAATTTGT CGTTACTTCG AAGAGCTGCA TCCAGAAAGC 
CCCCTAATGG GCAGCACGCC ATTAGAAAAA GCACAAATCG ACATGTGGCA GCGCCAGTGT 
GAATTCGGCC TTTTCATGCA AATCGGCATG TGTTTTCAAC ACTCTACGGG ATATTTCAAA 
GATCGTATGA CGCCTGTGCC TGAGTATGGA AAAATCGCCG GGCAAGACGC CGCTAAGTTT 
CTCGACATTT TAAACAATCG GTTAGCTGAG TATGAATTTA TCGCGGGCGA TAGATTCAGT 
ATTGCGGATA TCACAGCGGT ATGTTCAATC GATTTTGGTC GAGTGGTTAA TGTGCGGATT 
TCACCAGAGC AAACACACTT ACAGCGTTGG TACGATGCCG TTAGCGCACG CCCAGCCGCT 
AAAGCATAA
 
Protein sequence
MKIYETQTAP TPRRVRFFLA EKNLPMEYVQ VDIQGGENLS PAMRARNPMA KVPVLELDDG 
TCIYESVSIC RYFEELHPES PLMGSTPLEK AQIDMWQRQC EFGLFMQIGM CFQHSTGYFK 
DRMTPVPEYG KIAGQDAAKF LDILNNRLAE YEFIAGDRFS IADITAVCSI DFGRVVNVRI 
SPEQTHLQRW YDAVSARPAA KA