| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3874 |
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| Symbol | |
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| ID | 4175654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4668845 |
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| End bp | 4669924 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056902 |
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| Product | beta-lactamase |
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| Protein accession | YP_663428 |
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| Protein GI | 109900173 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGAGG AATGGCTAGA CGACTTTGCT AGTCGAGTGA AAGCTAAAAC GGCTAAGCAG
CGCGTGCCAG GTTATTTGTT CGCTTTTGTC GAAGAGGGCA AGCCAGCCAA GATGGTGGTG
TCGGGCAAAA CAGCCAATAA CGGTACGGCT ATCTCTCCGC AAACGGTTTT TCGCTTAGCG
TCAGTGTCGA AAACATTTAC CTCTATTTTA ATGGCAAAAA TGGTCGATGA GGATAAATTA
AGTTGGCAAA CCCCTGTGAA AAAAATGACC AACGAATACA GTTTTGATAA CAGCAAAAAC
TTACAGCTCA GTCATATTGT TGGTCAATCG AGCGGGTTCT CGCCTAATGC GTATGACAAT
CTCATTGAAG CAAATTACCC GGTCAAACGA GTACTTAGCA TGCTGACCGA TTTAAAGCCT
TTATGTACGC CGGGTGAATG CTACACCTAC CAAAATACCC TGTTTGGGGT TATCGAAGAG
TATTTTCAAG AAAATAACAC GTCGTACGGA CAACAATTAG AAGCTGAAGT ATTGCGCCCG
TTAAATATGA AAGGTGCCAG TGTAGGGCGT GAAGGCTTAC AAGCGTCGAA TTCATGGGCC
AAACCTCATG TAGCGATCGC GAAAAATAAA TGGCGCAGTG TGAAGGTTAA CGAAGACTAT
TATCGCTTTT CACCCGCCGC AGGGGTGAAC GCTAGCGGAG CTGATATGGT TAAGTGGGTT
GGGGCGCTGC TTGGCGAACA ACCTAATGTG ATTGGGCCGC AAATTATTGA TCAAGTGACA
CAACCTCGAG TCAAAACCAA ACGCGAAATG CACCGCCGCT TATGGCAACG TTACTTGAAA
GACGCGCATT ATGGTTTAGG TTGGCGTGTA TACGACTTTG ATGGGCATAA ATTGAATTAC
CACGGTGGCT GGGTCAAAGG TTATCGTGCA GCGGTTGCGT TCGCGCCGGA TCAAAAAGTG
GGCTATTTCA TGCTCATGAA TGCAGAATCA AATTTGATTA ATGATTTTAC GGCTGATTTT
TGGGCCAGTT ATTTTGAACA TTATGATGCC CAGCAAAAAC TAATCAGCGC GGCCCCATAA
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| Protein sequence | MGEEWLDDFA SRVKAKTAKQ RVPGYLFAFV EEGKPAKMVV SGKTANNGTA ISPQTVFRLA
SVSKTFTSIL MAKMVDEDKL SWQTPVKKMT NEYSFDNSKN LQLSHIVGQS SGFSPNAYDN
LIEANYPVKR VLSMLTDLKP LCTPGECYTY QNTLFGVIEE YFQENNTSYG QQLEAEVLRP
LNMKGASVGR EGLQASNSWA KPHVAIAKNK WRSVKVNEDY YRFSPAAGVN ASGADMVKWV
GALLGEQPNV IGPQIIDQVT QPRVKTKREM HRRLWQRYLK DAHYGLGWRV YDFDGHKLNY
HGGWVKGYRA AVAFAPDQKV GYFMLMNAES NLINDFTADF WASYFEHYDA QQKLISAAP
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