Gene Patl_3847 details

Gene Information

• Locus tag: Patl_3847
• ID: 4175627
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 4642873
• End bp: 4643523
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638056875
• Product: YhhN-like
• Protein accession: YP_663401
• Protein GI: 109900146
• COG category: [S] Function unknown
• COG ID: [COG3714] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATAGAA TAATCACAAC AATTTACTGG CTCTTAGCCC TAAGCTACAT AACAAGTACG 
CTGACAACGA CCTATTCGTG GAGCTTTCTA CATAAAGCGG CCCCGATATT ACTGCTAGGC 
GTCATCGCGG GAAAACAAAC AGATTTGCCA GCAAGATGGT GGTTAATAGC GGGCATATTG 
TCCAGCGCCG CGGGCGATAT GCTACTTGCC TTGCCTCTCA AGCACAGTTT CATACTGGGC 
CTTAGTGCAT TTGCCTTAGC ACACATTTTA TACTCGATAT TCTTGTTTCG TTGGCGAAAT 
CTTGACCGTT TAAATTTACT CACCGTCAGT TTATTTTCGG CGTATTTAGT GGCCATGCTG 
TTTCTGCTGC TACCTGCAGT CGGCTCGCTT CAACTGCCGG TAATAGGCTA TTTTGTTGCC 
ATAAGTGTAA TGTTTATCAG TGCGCTTGCA GCGAATACGC AGGGATATGC ATTACGCTTA 
GGCGCATTGT TGTTTGTGGT ATCTGATAGT TTATTGGCCA TTAATGCCTT TATCACGCCG 
TTACCTTTGC AAAGCGTACT TGTCATGAGT ACCTATTACG CGGCGCAATT TTTTATCGTG 
AAGGGCTGCA TTCAATTAGT AAAAGTGCCA AGGGGGAACG AGTTTGTCTA A 

 

Protein sequence

MHRIITTIYW LLALSYITST LTTTYSWSFL HKAAPILLLG VIAGKQTDLP ARWWLIAGIL 
SSAAGDMLLA LPLKHSFILG LSAFALAHIL YSIFLFRWRN LDRLNLLTVS LFSAYLVAML 
FLLLPAVGSL QLPVIGYFVA ISVMFISALA ANTQGYALRL GALLFVVSDS LLAINAFITP 
LPLQSVLVMS TYYAAQFFIV KGCIQLVKVP RGNEFV