| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3832 |
|---|
| Symbol | |
|---|
| ID | 4175612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 4627419 |
|---|
| End bp | 4628399 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638056860 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_663386 |
|---|
| Protein GI | 109900131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCT CATTTTTTAA CAGATCCAAG ATATTTTTGG ATGACATCTT CATACCTGCC
CTTCACGCTT TCATGCACAA CGTTGCGTTG GGTTGCATGC TGCTTGTACC AAGCATGACA
AGTGCCAGCA CCCTGACAGA TGTACAACGT CAATTGTTCC CCGACAAGGC TAAAATTCTA
CAAGCGAATA ACAAGTCTAC GGTAATCATT GAGTCACAAA ACACCACATC CAACTTAAAT
GGCGTCGCCA TATTAGTTGG CGAAACAGGC CGCCCTCCTT CGAGTCAGCA AAACTTAGCC
ATGCTTACCC AATATCTCAA TGATTTAGGT TGGGTGACTA TGCAAATAAC GCCGCCAACA
ATTGGGTTTG AGCCCGATTT GACCGATGAA AAAACGACCG CACCAGATTC TCAATCTCAA
GCGTCGACGA CTGACGAATC GCAAGATAAT ACAGCAAATG ATGAAACCGA GGCCGCACAG
GAAACGCCTA CCCCAGCTAA TAGCTCGCCT GCATCCCCTC AGTATCAGTT ACACCAGATA
AGCAATGGAC ACTTCTTGCA ACATGAACAA GAGCTACGTG GATTGATGCA GGCGGCAATG
GCTAGGGCTC AGAGTTACTC TGGTTTTAGA CTCATTATCG CCCAAGGCAC TAGCGCCGCT
TGGTTGATAA AGATATATGC TGAAAAACAA ATTCCCAGCC CTGATGCCCT AGTGACAATT
AGTCCTTTTT GGCCCCAGCG CAACTTGAAT GCGCTCATTG CGAATTACAC AGCAGTGACA
GAAATGCCAT TACTCGATAT TTATAGTCCT CAAGATAATA ATTGGAGTTT AATGAGTGCA
ACTCAACGCG GAATTGATGC CAGCAAAAAT CTAAAACTGG ACTATCGACA GCGACAACTC
ACCAACACAT TTAACACCTT TTCAGACAGC GCGTTTGTGA GTAAAGAAAT ATACGGCTGG
TTGCATTATT TAGGCTGGTG A
|
|---|
| Protein sequence | MNISFFNRSK IFLDDIFIPA LHAFMHNVAL GCMLLVPSMT SASTLTDVQR QLFPDKAKIL
QANNKSTVII ESQNTTSNLN GVAILVGETG RPPSSQQNLA MLTQYLNDLG WVTMQITPPT
IGFEPDLTDE KTTAPDSQSQ ASTTDESQDN TANDETEAAQ ETPTPANSSP ASPQYQLHQI
SNGHFLQHEQ ELRGLMQAAM ARAQSYSGFR LIIAQGTSAA WLIKIYAEKQ IPSPDALVTI
SPFWPQRNLN ALIANYTAVT EMPLLDIYSP QDNNWSLMSA TQRGIDASKN LKLDYRQRQL
TNTFNTFSDS AFVSKEIYGW LHYLGW
|
|---|
| |