| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3809 |
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| Symbol | |
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| ID | 4175589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4594309 |
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| End bp | 4595130 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056837 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_663363 |
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| Protein GI | 109900108 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTAATG ATAAGAGTAA AAAAGCAGCC ATTATCGGTG GCGGTGTTAT GGGGCTCACC
ACAGCCAGAT TATTGCAAGA AGCAGGCTGG AGCGTAACCA TTTATACCCG AGAAATGGCA
CGGCACACCA CGTCGCAAGT CGCTGGAGGT GAATGGGGCC CGTTCAGCGT GCATGACCCG
ATGGTATCTT CGGCTGCATT TAAATTGCAA TTGCAACTTG CAGCGCAAAT ATCCCATGAA
ACCTTTGCTC GTATGGTCGG CGACGACTAC GCGATAAAAT GGACAGAGTT ATATACTGCA
AGCGACACCC TCCCGGCGGC GGATAGTCCA TTTAGTCAGT TTTACCCCTA TCGACAGACC
TATGGCCCTG GTGAGCATCC CTTTACTACA AATTACTGTA CTGTGTCGGC AACCATGCTG
GTGGAGACTG GGACTTTCTT ACGTCGCTTG ATTCAAGACG TCAGAGCTGC TGGTGGTGTA
TTTGTGATCC GTGACTTTAA AGACCAAGAC GAAATACATG GGTTACAAGA GCCCGTTGTA
TTCAATTGCA CTGGTTTAGG TTCACGTGCC TTGTTTGGTG ATGAAGGGAT TACCCCTGCA
AAAGGCCAGT TGATTTTACT CCCACCAGAC CCAGCCGTAG ACTTTCTTAC TGTAGGCGGT
GGCAGTGGTA AAGGGCCGCT GTATATGTTT TCGCGAAATG ACTACATGAT CTTAGGCGGT
ACTTTCAAAC CAGGAGATTG GTCCACGCAA CCTGAGCCGC AAGAAACAGA GCGTATTTTA
ACTGAGAGCC AAGCGTTTTT TGCCGGGTTG TCTAAATCTT AA
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| Protein sequence | MGNDKSKKAA IIGGGVMGLT TARLLQEAGW SVTIYTREMA RHTTSQVAGG EWGPFSVHDP
MVSSAAFKLQ LQLAAQISHE TFARMVGDDY AIKWTELYTA SDTLPAADSP FSQFYPYRQT
YGPGEHPFTT NYCTVSATML VETGTFLRRL IQDVRAAGGV FVIRDFKDQD EIHGLQEPVV
FNCTGLGSRA LFGDEGITPA KGQLILLPPD PAVDFLTVGG GSGKGPLYMF SRNDYMILGG
TFKPGDWSTQ PEPQETERIL TESQAFFAGL SKS
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