| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3722 |
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| Symbol | |
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| ID | 4175502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4482102 |
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| End bp | 4483409 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056752 |
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| Product | signal peptide prediction |
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| Protein accession | YP_663278 |
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| Protein GI | 109900023 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAC AGTGTAAAAC GGAATCACTC GTGAGCGCTT CATCTGTCGA TAAATCCAAA
CGAACCACGT TAGAAACGAT TGGCAAAGGT GTGCTGCTCG GTACTTCTAT CATCAAAGCC
CCTTACGTTT TTGCCCGCCA GAAACACACT TTGCGCGTAT TAGGCACGCA CGTGACATTG
CAAGAGCCAC TCAGGCAGCG TGCAATGAGT GACCTGGGGA TAGATATTCA GTTTGAGGCA
AAAGGAAGCC CTGGCGTTTT ACAGCGTGGG TTACTTTCCC CTGAAAGTTT TGATATTTAC
GAACAATGGT CCAATAGTAT TCGTCCGCTG TGGCGGAATC GATCGATCCA AGCAATTGAG
ACCAAGCGCA TTACCCATTG GGATGAAATC AATTCGCTAT GCAAAACTGG GAAACTCACG
CCAAAAGCCA AGTACGGTGC CGGAGATGCC CCCTTTAAAA TAGTCAATGT ACAAGCAAAC
GGCTCACTGG GCGTTGAACA GACTGGCCAA GTTAGTTTCT TGCCCTACGT TCATAATGTC
GATTCATTTG GCTATAACAC CAATGAAATC GAAAAAGGCA TAGCCTACAA AACAGAAAGT
TGGGGCTGGC TTCTGGATAA AAAACACAGT GGAAAGGTGG GTATTATTAA CGACCCCACT
ATAGGCTTGT TTGATCTAGC GTTAGCGGCT GATGCGAGCG GCACAATGAA GTTTGCCGAC
ATAGGTAATA TTACTGCCGA TGAATTAGAT CGCCTGTTTG ATATTTTGAT TGATTTGAAA
CACCAAAACT TTTTTGGCGG CTTTTGGAAC TCAGTGCCAG AGTCGATTGA TTTCATGGAA
GCAGGACGGG TACACATTGA AAGCATGTTC TCCCCTGCGG TATCTACGTT AAATGGAAAA
AATATTCCAG TCACATTCGC TGCCCCTAAA GAAGGTTATC GCGGCTGGCA TGGAGTAATG
TGCTTATCTT CTCATGCCCA AGGGCGCACA AAAGATGTAG CATACGAATA TATGAATTGG
TGGATGTCGG GCTGGCCAGG CGCGTTTATC GCTCGTCAAG GGTATTATAT CTCCAACGCA
CAGCGCTCAG CTAATTACCT TGAGCAAAGC GAATGGGACT ACTGGTATGA TGGGAAGCCT
GCCAGCCAAC CTCTTAAAGG TCCGGATGGA AACACTTCGG TGATGCGAGG AGAGGTGCGC
TCAGGTGGCA GTTATACTGA CCGTTTTAGT AATGTGGCGG TTTGGAATAC GGCTATGCCG
ACTTACGACT ATACCTTACA AAAATGGTAT GAATTTATAA GCTCATGA
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| Protein sequence | MHKQCKTESL VSASSVDKSK RTTLETIGKG VLLGTSIIKA PYVFARQKHT LRVLGTHVTL
QEPLRQRAMS DLGIDIQFEA KGSPGVLQRG LLSPESFDIY EQWSNSIRPL WRNRSIQAIE
TKRITHWDEI NSLCKTGKLT PKAKYGAGDA PFKIVNVQAN GSLGVEQTGQ VSFLPYVHNV
DSFGYNTNEI EKGIAYKTES WGWLLDKKHS GKVGIINDPT IGLFDLALAA DASGTMKFAD
IGNITADELD RLFDILIDLK HQNFFGGFWN SVPESIDFME AGRVHIESMF SPAVSTLNGK
NIPVTFAAPK EGYRGWHGVM CLSSHAQGRT KDVAYEYMNW WMSGWPGAFI ARQGYYISNA
QRSANYLEQS EWDYWYDGKP ASQPLKGPDG NTSVMRGEVR SGGSYTDRFS NVAVWNTAMP
TYDYTLQKWY EFISS
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