| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3679 |
|---|
| Symbol | |
|---|
| ID | 4175459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4437840 |
|---|
| End bp | 4438337 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638056709 |
|---|
| Product | (2Fe-2S)-binding |
|---|
| Protein accession | YP_663235 |
|---|
| Protein GI | 109899980 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAT TTTCATTAAA CGGAAAAAAA ATCACAACCG ATGCTGAGGC TGATACGCCT
TTGCTTTGGG TTATACGAGA CGAGTTCGGC TTAAAAGGCA CCAAGTTTGG TTGCGGGATC
GCGATGTGCG GAGCATGTAC CGTGCATTTC AACGGTTCAC CTGTCCGTTC TTGTTCACTG
CCCATTAGTG CAATTGCTAA TGCTGAAATA CATACCATTG AAGGCTTGGA AAACAAGCAC
CCACTGCAAA AAGCGTGGGT AGAGCATCAA GTGCCTCAGT GTGGTTATTG TCAATCCGGG
CAAATCATGC AAGCCGCAGG TTTACTTGCG ACCAATGCTG ACCCCAGTGA AGAAGAAATA
GAGGCTTACA TGAGCGGTAA TTTATGCCGT TGCATGACCT ACGCCCGCAT CAAAGAAGCC
ATCCAAGACG TTGCGTCACA ATCAGATTCC GTGGTGCAAA TATACAACCC TAAACGCGAA
GCGCAGGGAG TAAGCTAA
|
|---|
| Protein sequence | MIEFSLNGKK ITTDAEADTP LLWVIRDEFG LKGTKFGCGI AMCGACTVHF NGSPVRSCSL
PISAIANAEI HTIEGLENKH PLQKAWVEHQ VPQCGYCQSG QIMQAAGLLA TNADPSEEEI
EAYMSGNLCR CMTYARIKEA IQDVASQSDS VVQIYNPKRE AQGVS
|
|---|
| |