| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3673 |
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| Symbol | |
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| ID | 4175453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4430094 |
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| End bp | 4430984 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056703 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_663229 |
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| Protein GI | 109899974 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCATTT TGGTCGATGC GATCCACGTT TTCGCGGAAA AAGCCGGATT ACTCAACCTT
GAGGGGCACG TTGAAACAGC ACTGTCTGGA GTGCGTTTCT TTCGCGCGAG TAAGGGGAGT
CCGAGGCAAC CACTGGTTTA TCAGTCTGGC ATTATCATAG TGGTGCAAGG TAGAAAGGTG
ATCCATTTTC CAGATCACCA CATTCAATAT GGTGCGGGCG ACTACCTAGT ACTCGGGGTG
CCAATGCCAT TGGAATGTGA AGCCTTTGTG GACAATGGTC TGCCTATCAT GGGGTTGTCT
ATAGATGTTA AGCCCGCGTT ATTACATCAA CTAGTTAATC ATATGCAGCA GCACCAACGA
TATACCCAAA GCGAGCCATG TAGCCAAATA AGTTGCGCCC AAGCGGCTAA AGTAGACGCG
CCCTTGGAGC ACACAATTCA GCGCTTACTA GCGGTACTGG CAAATCCTGT TGAAACTGAT
ATTTTTGGGG CAGATGTGGT CAAGGAATTG GTATACAGAG TGTTATGTGG TCCACAAGGA
AAGACCCTAT TTGGTCTCGC TCAGCACGAT GGCCACTACG CAAGAGTCGC AAGGGCGCTA
GCGTCTTTAC ACGCTAATTA CGCCAGTCCT ATAACGGTAG AAACCCTAGC TGATGACGTC
AACATGAGTG TATCGGCCTT TCACCGAGCG TTTAAGCAAG TGACGTTTGA GTCACCTTTG
CAATATTTAA AGAAAGTGCG TTTAGTCAAA GCAAAAGATT TGATCACAGC CAATGGCAGT
CGCGCTAACG AAGCGGCATT TCAAGTCGGT TACACCAGCG CATCTCAGTT TAGCCGCGAA
TTCAAACGCC ATTTTAATCA GTCACCAAGT GAAGTATCAA TGAGTGCCTA A
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| Protein sequence | MGILVDAIHV FAEKAGLLNL EGHVETALSG VRFFRASKGS PRQPLVYQSG IIIVVQGRKV
IHFPDHHIQY GAGDYLVLGV PMPLECEAFV DNGLPIMGLS IDVKPALLHQ LVNHMQQHQR
YTQSEPCSQI SCAQAAKVDA PLEHTIQRLL AVLANPVETD IFGADVVKEL VYRVLCGPQG
KTLFGLAQHD GHYARVARAL ASLHANYASP ITVETLADDV NMSVSAFHRA FKQVTFESPL
QYLKKVRLVK AKDLITANGS RANEAAFQVG YTSASQFSRE FKRHFNQSPS EVSMSA
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