Gene Patl_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3668 
Symbol 
ID4175448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp4424721 
End bp4425263 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content45% 
IMG OID638056698 
Producthypothetical protein 
Protein accessionYP_663224 
Protein GI109899969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000166039 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAGT CGTATATTTT TGGGTTATCA CTTTTCTTGG TCATACTCTC AGGAACTGTT 
CACGCTAGAG AGCAAGGGTA CGCCATTGAC TTTCTAAATG GTGAAGGGAG CACGCAGGGG 
ATCCGTTTGG CATACCGACC TTTCACGCAT CAGGTGGCCG AAATACCTTG GCTGGGTAAG 
GTGGATTTAT ATTGGGAAGT CAGCGCCAAT TTCTGGGAGT ACGGAGAGCA AAATAGCCAC 
CAGACAAATT ACGCGATATC TCTTTCACCG GTCATATCGA AGCAATTTAC TACGTTGTGG 
GACCAATACC CAGTAAAGTG GGAAGCAGGT ATCGGCGTGA GTCTAGTGAA AGATAGAAAA 
TTTGCCGGAA AAGACATTGG CTCTCACTAC CAATTCGAAG ATAGATTGGG GGTAAAAGTC 
GAATTTGGAC AGAATAACAC TTCGTCCTTG GCGCTACGAT ATATGCACTA TTCTAACGGC 
GGTCTGGGGA GTAAGAATCC TGGAATGGAC TTTTTGAACA TCGCATACGC AAAATCATTC 
TGA
 
Protein sequence
MRKSYIFGLS LFLVILSGTV HAREQGYAID FLNGEGSTQG IRLAYRPFTH QVAEIPWLGK 
VDLYWEVSAN FWEYGEQNSH QTNYAISLSP VISKQFTTLW DQYPVKWEAG IGVSLVKDRK 
FAGKDIGSHY QFEDRLGVKV EFGQNNTSSL ALRYMHYSNG GLGSKNPGMD FLNIAYAKSF