| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3665 |
|---|
| Symbol | |
|---|
| ID | 4175445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4421790 |
|---|
| End bp | 4422779 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638056695 |
|---|
| Product | Mg2+ transporter protein, CorA-like |
|---|
| Protein accession | YP_663221 |
|---|
| Protein GI | 109899966 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0598] Mg2+ and Co2+ transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00199439 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATC AGCAAGAACA GAACTCAAAT CAACGCGATA GCTTTTTATG GGCGTATTAT
TTTACGGACG GCTCGGCCAG CCCTGTCGAT TTAGCAGGAC TGAAAGCGAC AAAGAATAAA
CCGGGCTTTT CTTGGGTGCA TTTGCAGTCG GACTCGATTG ACGCAGAACA AACAATGTAT
GACCTAGGGT TATCGAAAAA CGTTGCTGAC TCCCTGATCG CCCTAGAGAC GCGGCCTAAA
ACCTTAAGTA TGGATGGTGG TTTAGTCGTT TACTTACGCG GTATTAATAC TAACCCTGAT
GCTGATCCAG AAGACATGGT GTCGTTGCGC TTGTGGCTAA CCGAAAAAGG CATTGTGTCA
GCCAGGCGTA AAGATAGAAA ATTATATTCA GTACAAGACG TTAAAAATGA TATTGACCAA
GGTACTAAAA TAACCAGTGC TGGTGATTTG CTGCTAGAAG TGATTGAGCG AGTGGTCGTC
CATATAAGCG AAATGGTTGA TATTTTAGAT GAAGAGCTAG TCGATTTTGA AACATCAGAA
TCTATGGATA GCAAAGCGCG TCAACGTTTG TCCACTGTGC GTCGACAAGC TGCCTCAATA
CGCCGCTACT TGGCACCGCA ACGAGACGCT CTGGATACAT TGTACCGCAG CAACCAGTTT
TTAAACTCCG AGCAAGCATT TACGTTAAGA GAGCTAAGCG ACAGAGCCAC GCGCTATGTA
GAAGATTTAG ATCTCGCCCG TGAACGTGCA ATCGTATTGC AAGACGAAGT ACGCAACCGA
ATTGCCGATC GCCAAGGCAT GGTGATGTAC GTTTTGTCGC TAGTTACGGC GATTTTCTTG
CCTCTGTCAT TTCTGACCGG CGTTTTTGGC ATGAACGTGG GCGGATTACC CGGTATTGAT
AACCCGCATG CGTTCAATGT TTTAACCTTC TCTATGTTGG GGCTTGTTGC CTTATTAGGC
GGCTTTATGG TGTGGAAAAA GTGGTTCTGA
|
|---|
| Protein sequence | MQHQQEQNSN QRDSFLWAYY FTDGSASPVD LAGLKATKNK PGFSWVHLQS DSIDAEQTMY
DLGLSKNVAD SLIALETRPK TLSMDGGLVV YLRGINTNPD ADPEDMVSLR LWLTEKGIVS
ARRKDRKLYS VQDVKNDIDQ GTKITSAGDL LLEVIERVVV HISEMVDILD EELVDFETSE
SMDSKARQRL STVRRQAASI RRYLAPQRDA LDTLYRSNQF LNSEQAFTLR ELSDRATRYV
EDLDLARERA IVLQDEVRNR IADRQGMVMY VLSLVTAIFL PLSFLTGVFG MNVGGLPGID
NPHAFNVLTF SMLGLVALLG GFMVWKKWF
|
|---|
| |