Gene Patl_3619 details

Gene Information

• Locus tag: Patl_3619
• ID: 4175399
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 4357223
• End bp: 4357990
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638056649
• Product: XRE family transcriptional regulator
• Protein accession: YP_663175
• Protein GI: 109899920

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCAGA TTAGCCAAAT CAGCAACACC TTAAAGCAGT TGCTACGTCA GCATCAGATA 
ACGTACAAAT ACATTGCCGA AAAACTCGAC ATGAGCGAAG CAAACGTAAA ACGCATCTTC 
TCAACGAACA GCTTTGCATT GGACCGCTTA GAGCAAATTT GTGAGATTTT GCAGATGAGC 
CTTTCTGACT TATTCATCAT CGCCCAAAAG CAAACCCAGC AACTGACTCA GCTCACCGAA 
GAACAAGAAA ATGAATTATT GGCTGACACT AAATTGTTAC TCGTTGCCGT GTGCGTGCGC 
GATGCTTGGA CTTTTGATGA AATCATTGGG CATTACGCTA TCGACACTCA TGAATGTGTG 
CAGTTACTGG CTAAGTTAGA TCGCATTAAA ATTATCGATT TACTGCCTAA CAATCACTAC 
AAGTCTCTGA TTGCACAAGA TTTCAGATGG ATACCCGGCG GGCCATTAGA GCGATTTATG 
GAGCGAGAGG TCATGGTGAA ATTTATGGCG CCTAAGAAGG AAGAGCCATG GACTTTTCGA 
TTTTACCTGC GTGGGCGTTA CTCACAGACA TCAGTGGATA TTATCCAGCG AAAACTTAAT 
CAACTAACCA AAGAGGCTGC GGTACTAAAC CAAGAAGATG CCAGTTTGCC ATTGAGTAAA 
CGCCAGCACT TTGGCTTACT AATGGCCATG CGCCCGTGGG AGCCTTCGTT GTTTGAAAAC 
CTGCATCGAG AAAACCTACC TCGTGAAAGC CCACTTAATA AAAGCTAA 

 

Protein sequence

MSQISQISNT LKQLLRQHQI TYKYIAEKLD MSEANVKRIF STNSFALDRL EQICEILQMS 
LSDLFIIAQK QTQQLTQLTE EQENELLADT KLLLVAVCVR DAWTFDEIIG HYAIDTHECV 
QLLAKLDRIK IIDLLPNNHY KSLIAQDFRW IPGGPLERFM EREVMVKFMA PKKEEPWTFR 
FYLRGRYSQT SVDIIQRKLN QLTKEAAVLN QEDASLPLSK RQHFGLLMAM RPWEPSLFEN 
LHRENLPRES PLNKS