| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3594 |
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| Symbol | |
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| ID | 4175374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4327750 |
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| End bp | 4328823 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056624 |
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| Product | putative general secretion pathway protein A |
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| Protein accession | YP_663150 |
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| Protein GI | 109899895 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | [TIGR03015] putative secretion ATPase, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGAAA ATTATTACGG ATTAAATTCA AAGCCTTTTC AGCTCACGCC TGACCCTAGC
TTCTTTTTTG CTAGTAAATG GCATAAGCGA GCTATGTCAT ATCTACAGTA CGGTTTGTCA
CAAGCTGAAG GGTTTATCGT TATCACAGGC GACATTGGCA CAGGTAAAAC CACTATTGCC
AATAGCTTAC TGGATGCCAT GGAGGCCGGC ATCGTGGCAG CGCAAATTGT GACGCCCAAA
TTGACCCCTG ACGAACTAGT GAAAATGGTC GCCAGTAAGT TCGAAATTCC CGTAAAAGGC
AGCACTAAAT CCGACATTTT AGGGGACTTA GAACTCTTCC TTACTCAGTT GCACCAACAA
GGAAAACGCG CCTTATTGCT GGTGGACGAA GCGCAAAACT TGCCCTTAGA AACCATCGAA
GAATTACGCA TGTTGTCGAA TTATCAAAAG AACGGTAAGC CGCTGCTGCA AAGTTTCTTA
TTAGGCCAAG AAGAATTACA ACCCATATTG CGCGCGCCGA ATATGGAACA GTTTCGTCAG
CGTATTGTGG CCTCTTGTCA TTTATCCCCG TTAACAGAAG ACGAGTGCCA AGCCTATATA
GAGTATCGAT TGCATCACGC TGGCTATAGC GGCAAAACGT TATTCTCAAG CGATGCCTAC
AGCAAAATAT TTGTGTTCAC CCGTGGGGTG CCTCGTAAAA TTAATACCCT GATGGACCGC
ATCCTACTGT ATGGATTCCT TGAAGAGCTC GAAACGTTTG ACGAAGATGC CGTAGAAGCG
GTAGTGAAAG AAGTCGCCGA TGAAATGTTT CTACCAGAGA ACAAGGTGCC AGAAGAACAA
GCCCCAGAGC AGGCGCCAAG TGATGGCCAG CCCGCTGCGG CACCATCAAC ATCCGCCTCA
GGCGAAACCA GACCTGATGT GTTAAAAGAT GTGACGTATT ACAAGACCAT GCTCACTGAA
TTAACTGATG CATTAGATGA CGCCATTAGT CACAAGATCA AATTGACCCG TTACATAGAT
AAACTGCTAA AAAAGAAATA CAGAACTTAT GTGCGTTTAA AGTCTGACGA TTAA
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| Protein sequence | MYENYYGLNS KPFQLTPDPS FFFASKWHKR AMSYLQYGLS QAEGFIVITG DIGTGKTTIA
NSLLDAMEAG IVAAQIVTPK LTPDELVKMV ASKFEIPVKG STKSDILGDL ELFLTQLHQQ
GKRALLLVDE AQNLPLETIE ELRMLSNYQK NGKPLLQSFL LGQEELQPIL RAPNMEQFRQ
RIVASCHLSP LTEDECQAYI EYRLHHAGYS GKTLFSSDAY SKIFVFTRGV PRKINTLMDR
ILLYGFLEEL ETFDEDAVEA VVKEVADEMF LPENKVPEEQ APEQAPSDGQ PAAAPSTSAS
GETRPDVLKD VTYYKTMLTE LTDALDDAIS HKIKLTRYID KLLKKKYRTY VRLKSDD
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