| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3507 |
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| Symbol | |
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| ID | 4175286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4210540 |
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| End bp | 4211136 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056536 |
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| Product | 5-formyltetrahydrofolate cyclo-ligase |
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| Protein accession | YP_663063 |
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| Protein GI | 109899808 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
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| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.805722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGTAC CTGATAAGCG TAATCAATTA CGACGACACT TTCGCCAAGC GCGTAATAAC
CTCAGCCAAG CACAACAGAC TTTTGCTAGC GAGCAACTTT TGATGCAGTG CAGTGCTCTG
ACTGAATATC AAAATGCCCA CGTTGTGGCT TGTTATTTAG CGCAAGATGG CGAAATCGCA
TTGACCCCAT TAATTAACGA TGCTTGGTTG AAGGGCAAAA CCGTTTGCTT GCCCGTGCTA
CACCCTTTTT GCAAAGGACA TTTAGTTTTC GTGCGCTACC GACAAAACAG TAAAATGCAG
ACCAATCGCT TTGGCATTCT CGAGCCTAAG CTTAACGCCT GTGACATTGT CCCCATTGCA
AAACTTGACG TTATTTTTAC TCCGTTAGTT GCCTTCGATG ACACCGCCCA ACGATTGGGC
ATGGGAGGGG GGTTTTATGA TCGTACGCTG GCCCCAGTGA CACGCCATGA AATACCTTTG
CAGATATACG GGGTGGCCCA CGACTGCCAG AAAGTAAGCA GCGGCTTAAA AACTGAAAAG
TGGGATATTC CCATGCACAA GATAATGACG CCATCGCATG TCTATAGCCA CGCCTAA
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| Protein sequence | MPVPDKRNQL RRHFRQARNN LSQAQQTFAS EQLLMQCSAL TEYQNAHVVA CYLAQDGEIA
LTPLINDAWL KGKTVCLPVL HPFCKGHLVF VRYRQNSKMQ TNRFGILEPK LNACDIVPIA
KLDVIFTPLV AFDDTAQRLG MGGGFYDRTL APVTRHEIPL QIYGVAHDCQ KVSSGLKTEK
WDIPMHKIMT PSHVYSHA
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